- PNKP:
- polynucleotide kinase 3'-phosphatase
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
T109 | LTLRWEETRTPESQP | 1 | 20 | - | - | - | - | - | - | - | - | - | - | 10 | 10 | - | - | - | - | - | - | - | - |
T111 | LRWEETRTPESQPDT | 5 | 155 | 9 | - | - | - | - | - | - | - | - | - | 39 | 37 | 8 | 8 | - | - | 12 | 5 | 30 | 7 |
S114 | EETRTPESQPDTPPG | 10 | 908 | 8 | - | 99 | 76 | 70 | 64 | 8 | - | 103 | 59 | 4 | 4 | 98 | 89 | 11 | 5 | 86 | 36 | 70 | 18 |
T118 | TPESQPDTPPGTPLV | 10 | 1553 | 122 | - | 103 | 80 | 97 | 100 | 99 | - | 108 | 62 | 108 | 99 | 110 | 101 | 83 | 19 | 105 | 44 | 95 | 18 |
T122 | QPDTPPGTPLVSQDE | 10 | 832 | 9 | - | 16 | 16 | 4 | 5 | 91 | - | 108 | 62 | 108 | 99 | 25 | 25 | 6 | 2 | 105 | 44 | 89 | 18 |
S143 | PKKRMRKSNPGWENL | 5 | 183 | 23 | - | - | - | - | - | - | - | - | - | 25 | 25 | 17 | 16 | - | - | 5 | 1 | 55 | 16 |
Y211 | RELEAEGYKLVIFTN | 1 | 18 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 15 | 3 | - | - | - | - |
S364 | SRALLSASPEVVVAV | 2 | 108 | - | - | - | - | - | - | - | - | - | - | 34 | 31 | 22 | 21 | - | - | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
T109 | LTLRWEETRTPESQP | - | - | - | - | - | - | - | - | - | - | - |
T111 | LRWEETRTPESQPDT | 1.3e-4 | - | - | - | - | - | 1.3e-4 | - | - | - | - |
S114 | EETRTPESQPDTPPG | 2.4e-11 | - | -1.8e-4 | 7.5e-15 | - | 4.4e-12 | - | 3.8e-6 | - | 0.74 | 0.65 |
T118 | TPESQPDTPPGTPLV | 0.058 | - | -1.3e-12 | 3.1e-12 | - | 7.6e-3 | 5.4e-13 | 8.3e-4 | 0.4 | -2.8e-11 | -0.055 |
T122 | QPDTPPGTPLVSQDE | 6.4e-3 | - | - | - | - | 8.4e-5 | 8.7e-7 | 0.011 | - | -3.2e-11 | 0.18 |
S143 | PKKRMRKSNPGWENL | -0.22 | - | - | - | - | - | -0.22 | - | - | - | -0.62 |
Y211 | RELEAEGYKLVIFTN | - | - | - | - | - | - | - | - | - | - | - |
S364 | SRALLSASPEVVVAV | -4.7e-4 | - | - | - | - | - | -4.9e-4 | -0.14 | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |