LinkedOmicsKB Release 1 (05/08/2023)

Breast Cancer
  • Meta table
  • Tumor case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • RNAseq, gene level, RSEM
  • RNAseq, gene level, TPM
  • RNAseq, isoform level
  • miRNA
  • Gene fusion
  • Proteomics
  • Phosphoproteomics
Clear Cell Renal Cell Carcinoma
  • Meta table
  • Tumor case list
  • Normal case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • Methylation, Tumor
  • Methylation, Normal
  • RNAseq, gene level, RSEM, Tumor
  • RNAseq, gene level, TPM, Tumor
  • RNAseq, gene level, Normal
  • RNAseq, isoform level, Tumor
  • RNAseq, isoform level, Normal
  • miRNA, Tumor
  • miRNA, Normal
  • circRNA, Tumor
  • circRNA, Normal
  • Gene fusion, Tumor
  • Proteomics, Tumor
  • Proteomics, Normal
  • Phosphoproteomics, Tumor
  • Phosphoproteomics, Normal
Colon Adenocarcinoma
  • Meta table
  • Tumor case list
  • Normal case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • RNAseq, gene level, RSEM, Tumor
  • RNAseq, gene level, TPM, Tumor
  • RNAseq, isoform level, Tumor
  • miRNA, Tumor
  • Gene fusion, Tumor
  • Proteomics, Tumor
  • Proteomics, Normal
  • Phosphoproteomics, Tumor
  • Phosphoproteomics, Normal
Glioblastoma
  • Meta table
  • Tumor case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • Methylation, Tumor
  • RNAseq, gene level, RSEM, Tumor
  • RNAseq, gene level, TPM, Tumor
  • RNAseq, isoform level, Tumor
  • miRNA, Tumor
  • circRNA, Tumor
  • Gene fusion, Tumor
  • Proteomics, Tumor
  • Phosphoproteomics, Tumor
Head and Neck Squamous Cell Carcinoma
  • Meta table
  • Tumor case list
  • Normal case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • Methylation, Tumor
  • Methylation, Normal
  • RNAseq, gene level, RSEM, Tumor
  • RNAseq, gene level, TPM, Tumor
  • RNAseq, gene level, Normal
  • RNAseq, isoform level, Tumor
  • RNAseq, isoform level, Normal
  • miRNA, Tumor
  • miRNA, Normal
  • circRNA, Tumor
  • circRNA, Normal
  • Gene fusion, Tumor
  • Proteomics, Tumor
  • Proteomics, Normal
  • Phosphoproteomics, Tumor
  • Phosphoproteomics, Normal
Lung Squamous Cell Carcinoma
  • Meta table
  • Tumor case list
  • Normal case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • Methylation, Tumor
  • Methylation, Normal
  • RNAseq, gene level, RSEM, Tumor
  • RNAseq, gene level, TPM, Tumor
  • RNAseq, gene level, Normal
  • RNAseq, isoform level, Tumor
  • RNAseq, isoform level, Normal
  • miRNA, Tumor
  • miRNA, Normal
  • circRNA, Tumor
  • circRNA, Normal
  • Gene fusion, Tumor
  • Proteomics, Tumor
  • Proteomics, Normal
  • Phosphoproteomics, Tumor
  • Phosphoproteomics, Normal
Lung Adenocarcinoma
  • Meta table
  • Tumor case list
  • Normal case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • Methylation, Tumor
  • Methylation, Normal
  • RNAseq, gene level, RSEM, Tumor
  • RNAseq, gene level, TPM, Tumor
  • RNAseq, gene level, Normal
  • RNAseq, isoform level, Tumor
  • RNAseq, isoform level, Normal
  • miRNA, Tumor
  • miRNA, Normal
  • circRNA, Tumor
  • circRNA, Normal
  • Gene fusion, Tumor
  • Proteomics, Tumor
  • Proteomics, Normal
  • Phosphoproteomics, Tumor
  • Phosphoproteomics, Normal
Ovarian Cancer
  • Meta table
  • Tumor case list
  • Normal case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • RNAseq, gene level, RSEM, Tumor
  • RNAseq, gene level, TPM, Tumor
  • RNAseq, isoform level, Tumor
  • miRNA, Tumor
  • Gene fusion, Tumor
  • Proteomics, Tumor
  • Proteomics, Normal
  • Phosphoproteomics, Tumor
  • Phosphoproteomics, Normal
Pancreatic Ductal Adenocarcinoma
  • Meta table
  • Tumor case list
  • Normal case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • Methylation, Tumor
  • Methylation, Normal
  • RNAseq, gene level, RSEM, Tumor
  • RNAseq, gene level, TPM, Tumor
  • RNAseq, gene level, Normal
  • RNAseq, isoform level, Tumor
  • RNAseq, isoform level, Normal
  • miRNA, Tumor
  • miRNA, Normal
  • circRNA, Tumor
  • circRNA, Normal
  • Gene fusion, Tumor
  • Proteomics, Tumor
  • Proteomics, Normal
  • Phosphoproteomics, Tumor
  • Phosphoproteomics, Normal
Uterine Corpus Endometrial Carcinoma
  • Meta table
  • Tumor case list
  • Normal case list
  • Survival
  • Phenotype
  • Somatic mutation
  • Somatic mutation, gene level
  • Copy number variation, GISTIC level
  • Copy number variation, log2 ratio
  • Methylation, Tumor
  • RNAseq, gene level, RSEM, Tumor
  • RNAseq, gene level, TPM, Tumor
  • RNAseq, isoform level, Tumor
  • miRNA, Tumor
  • circRNA, Tumor
  • Gene fusion, Tumor
  • Proteomics, Tumor
  • Proteomics, Normal
  • Phosphoproteomics, Tumor
  • Phosphoproteomics, Normal