Basic information

Full name
alcohol dehydrogenase 4 (class II), pi polypeptide
Ensembl
ENSG00000198099.8
Summary
This gene encodes class II alcohol dehydrogenase 4 pi subunit, which is a member of the alcohol dehydrogenase family. Members of this enzyme family metabolize a wide variety of substrates, including ethanol, retinol, other aliphatic alcohols, hydroxysteroids, and lipid peroxidation products. Class II alcohol dehydrogenase is a homodimer composed of 2 pi subunits. It exhibits a high activity for oxidation of long-chain aliphatic alcohols and aromatic alcohols and is less sensitive to pyrazole. This gene is localized to chromosome 4 in the cluster of alcohol dehydrogenase genes. [provided by RefSeq, Jul 2008]
Annotation
Druggable target (Tier T4)

Protein product

Phosphosites on the primary protein product
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Tumor and normal comparison

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Signed p-values
Data type
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
RNA-7.8e-20--6.8e-18---9.1e-216.4e-4-7.6e-7--0.37-
protein-2.3e-43--2.7e-5---6.2e-27-2.8e-10-1.2e-9--3.9e-4-

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

mRNA expression at gene level
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC1234567891011log2(RSEM+1)tumornormal
Protein expression
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC1415161718192021222324252627log2(MS1 intensity)tumornormal

* Mild outlier: filled circle; Extreme outlier: empty circle.

Phenotype and mutation association

Manhattan plot summarizing associations of phenotypes and mutations across all cohorts and omics data types

BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC01234567891011120-1-2-3-4-5-6-7-8-9-10-11-12Pan-cancer0246810121416180-2-4-6-8-10-12-14-16-18proteinRNASCNVclinicalpathwaycell typegenomicmutation-log10 of P-value

* Data points of significant associations above and below the dotted lines can be hovered to show the phenotype.

Associations of the protein abundance of ADH4 with phenotypes and mutations

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Signed p-values
Phenotype
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
HALLMARK_TGF_BETA_SIGNALING9.1e-50.110.063--0.0480.91-0.223.4e-40.0920.14
HALLMARK_APICAL_SURFACE1.4e-40.545.7e-3--0.240.074-0.420.190.226.6e-3
HALLMARK_HYPOXIA5.5e-40.160.34--0.0230.85-10.0490.460.1
HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION1.4e-30.30.075--0.150.77-0.660.0180.440.067
HALLMARK_ESTROGEN_RESPONSE_EARLY1.5e-30.110.5--0.0250.370.640.110.580.38
HALLMARK_COAGULATION1.5e-30.190.29--0.0260.73-0.680.520.383.6e-3
HALLMARK_KRAS_SIGNALING_UP1.7e-30.0430.028--0.0910.72-0.740.21-0.550.024
HALLMARK_APICAL_JUNCTION1.9e-30.110.13--0.0470.95-0.315.9e-30.770.11
ESTIMATE: StromalScore2.7e-30.0820.064--0.0760.81-0.80.36-0.790.013
HALLMARK_APOPTOSIS3.4e-30.170.5--0.0860.770.90.190.540.028
Showing 1 to 10 of 256 rows

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Cis-association

Associations between omics data of ADH4

BRCA0.370.050.03proteinmRNASCNVmethylationCCRCC0.01-0.130.01proteinmRNASCNVmethylationCOAD0.10proteinmRNASCNVmethylationGBM0.11proteinmRNASCNVmethylationHNSCC-0.040.09-0.07proteinmRNASCNVmethylationLSCC-0.01-0.010.19proteinmRNASCNVmethylationLUAD0.14-0.270.12proteinmRNASCNVmethylationOV0.44-0.120.10proteinmRNASCNVmethylationPDAC0.050.080.11proteinmRNASCNVmethylationUCEC0.10-0.150.20proteinmRNASCNVmethylation

* The numbers are Spearman correlation coefficients and can be clicked to show the scatter plots. The color and size of the circles correlate with the coefficients.

Trans-association

Associations of the protein abundance of ADH4 and the protein abundance of other genes

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Signed p-values
Gene
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Gene set enrichment analysis

Submit genes and the common logarithm of the p-values of their association with to WebGestalt.