Basic information

Full name
Janus kinase 2
Ensembl
ENSG00000096968.14
Summary
This gene encodes a non-receptor tyrosine kinase that plays a central role in cytokine and growth factor signalling. The primary isoform of this protein has an N-terminal FERM domain that is required for erythropoietin receptor association, an SH2 domain that binds STAT transcription factors, a pseudokinase domain and a C-terminal tyrosine kinase domain. Cytokine binding induces autophosphorylation and activation of this kinase. This kinase then recruits and phosphorylates signal transducer and activator of transcription (STAT) proteins. Growth factors like TGF-beta 1 also induce phosphorylation and activation of this kinase and translocation of downstream STAT proteins to the nucleus where they influence gene transcription. Mutations in this gene are associated with numerous inflammatory diseases and malignancies. This gene is a downstream target of the pleiotropic cytokine IL6 that is produced by B cells, T cells, dendritic cells and macrophages to produce an immune response or inflammation. Disregulation of the IL6/JAK2/STAT3 signalling pathways produces increased cellular proliferation and myeloproliferative neoplasms of hematopoietic stem cells. A nonsynonymous mutation in the pseudokinase domain of this gene disrupts the domains inhibitory effect and results in constitutive tyrosine phosphorylation activity and hypersensitivity to cytokine signalling. This gene and the IL6/JAK2/STAT3 signalling pathway is a therapeutic target for the treatment of excessive inflammatory responses to viral infections. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2020]
Annotation
Cancer driver (Oncogene) Druggable target (Tier T1) Protein Kinase

Protein product

Phosphosites on the primary protein product
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Tumor and normal comparison

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Signed p-values
Data type
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
RNA-2.8e-18-2.9e-5---5.9e-3-6.3e-20-3.1e-27--0.33-
protein-1.3e-18-4.6e-18----2.3e-30-3.2e-34-0.65-2.5e-6

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

mRNA expression at gene level
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC6.577.588.599.51010.51111.51212.513log2(RSEM+1)tumornormal
Protein expression
BRCACCRCCCOADGBMLSCCLUADOVPDACUCEC16.51717.51818.51919.52020.52121.52222.52323.5log2(MS1 intensity)tumornormal

* Mild outlier: filled circle; Extreme outlier: empty circle.

Phenotype and mutation association

Manhattan plot summarizing associations of phenotypes and mutations across all cohorts and omics data types

BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC02468101214161820222426280-2-4-6-8-10-12-14-16-18-20-22-24-26-28Pan-cancer01020304050607080901000-10-20-30-40-50-60-70-80-90-100proteinRNASCNVclinicalpathwaycell typegenomicmutation-log10 of P-value

* Data points of significant associations above and below the dotted lines can be hovered to show the phenotype.

Associations of the protein abundance of JAK2 with phenotypes and mutations

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Signed p-values
Phenotype
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
ESTIMATE: ESTIMATEScore3.3e-354.9e-47.8e-70.311.5e-3-2.2e-162.2e-160.494.7e-34.3e-6
xcell: microenvironment score5.9e-351.0e-52.1e-60.0828.7e-4-2.2e-161.4e-80.745.1e-43.8e-7
ESTIMATE: ImmuneScore1.2e-343.8e-52.2e-60.141.2e-3-2.2e-162.2e-160.492.8e-31.6e-3
HALLMARK_ALLOGRAFT_REJECTION2.1e-294.3e-41.7e-50.230.013-2.2e-162.2e-160.617.6e-37.5e-3
HALLMARK_IL2_STAT5_SIGNALING8.3e-281.8e-36.7e-50.228.8e-3-2.2e-162.2e-160.670.18.4e-4
xcell: immune score1.3e-241.9e-49.5e-40.141.7e-3-2.2e-163.1e-80.849.8e-30.011
PROGENy: Trail1.1e-225.7e-37.1e-60.520.038-2.2e-161.2e-60.410.0385.4e-4
HALLMARK_IL6_JAK_STAT3_SIGNALING7.7e-213.2e-40.0260.580.014-2.2e-168.2e-110.90.0470.015
xcell: T cell CD8+ central memory5.3e-203.1e-41.9e-70.220.86-2e-114.3e-9-0.670.0430.002
HALLMARK_INTERFERON_GAMMA_RESPONSE8.7e-208.0e-52.3e-40.420.043-2.2e-166.6e-80.990.390.018
Showing 1 to 10 of 256 rows

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Cis-association

Associations between omics data of JAK2

BRCA0.440.190.34proteinmRNASCNVmethylationCCRCC0.600.120.220.030.26-0.08proteinmRNASCNVmethylationCOAD0.210.250.24proteinmRNASCNVmethylationGBM0.57-0.330.45-0.180.62-0.38proteinmRNASCNVmethylationHNSCC-0.020.64-0.07proteinmRNASCNVmethylationLSCC0.83-0.170.56-0.210.64-0.42proteinmRNASCNVmethylationLUAD0.68-0.160.35-0.220.49-0.05proteinmRNASCNVmethylationOV0.510.500.47proteinmRNASCNVmethylationPDAC0.39-0.180.440.140.57-0.02proteinmRNASCNVmethylationUCEC0.43-0.090.09-0.180.18-0.07proteinmRNASCNVmethylation

* The numbers are Spearman correlation coefficients and can be clicked to show the scatter plots. The color and size of the circles correlate with the coefficients.

Trans-association

Associations of the protein abundance of JAK2 and the protein abundance of other genes

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Signed p-values
Gene
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Gene set enrichment analysis

Submit genes and the common logarithm of the p-values of their association with to WebGestalt.