Basic information

Full name
oxidized low density lipoprotein receptor 1
Ensembl
ENSG00000173391.9
Summary
This gene encodes a low density lipoprotein receptor that belongs to the C-type lectin superfamily. This gene is regulated through the cyclic AMP signaling pathway. The encoded protein binds, internalizes and degrades oxidized low-density lipoprotein. This protein may be involved in the regulation of Fas-induced apoptosis. This protein may play a role as a scavenger receptor. Mutations of this gene have been associated with atherosclerosis, risk of myocardial infarction, and may modify the risk of Alzheimer's disease. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Feb 2010]
Annotation
Druggable target (Tier T5) Receptor

Protein product

Phosphosites on the primary protein product
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Tumor and normal comparison

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Signed p-values
Data type
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
RNA-0.5-1.5e-11--6.2e-19-6e-32-5.2e-28-0.97-
protein-1.1e-6----0.21-5.9e-9-8.6e-15-9.5e-3-

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

mRNA expression at gene level
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC1234567891011121314log2(RSEM+1)tumornormal
Protein expression
BRCACOADGBMHNSCCLSCCLUADPDACUCEC141516171819202122232425log2(MS1 intensity)tumornormal

* Mild outlier: filled circle; Extreme outlier: empty circle.

Phenotype and mutation association

Manhattan plot summarizing associations of phenotypes and mutations across all cohorts and omics data types

BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC02468101214161820220-2-4-6-8-10-12-14-16-18-20-22Pan-cancer01020304050607080901000-10-20-30-40-50-60-70-80-90-100proteinRNASCNVclinicalpathwaycell typegenomicmutation-log10 of P-value

* Data points of significant associations above and below the dotted lines can be hovered to show the phenotype.

Associations of the protein abundance of OLR1 with phenotypes and mutations

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Signed p-values
Phenotype
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
cibersort: Neutrophil2.8e-32---0.217.2e-92.2e-152.1e-8-3.0e-61.9e-4
PROGENy: TNFa3.1e-24---0.024.0e-51.8e-81.1e-7-2.0e-66.2e-3
PROGENy: NFkB1.2e-22---0.0384.3e-68.2e-82.9e-6-2.9e-69.4e-3
xcell: Neutrophil1.4e-19---0.341.1e-104e-90.024-3.1e-32.5e-4
xcell: Monocyte1.1e-14---0.0142.9e-51.5e-80.12-6.1e-30.019
HALLMARK_TNFA_SIGNALING_VIA_NFKB3.1e-13---0.0573.8e-31.6e-56.3e-3-5.5e-50.046
HALLMARK_INFLAMMATORY_RESPONSE1e-11---0.0156.7e-42.2e-50.093-5.2e-40.15
cibersort: Mast cell resting5.3e-11---0.534.5e-33.7e-31.4e-5-0.022.5e-3
HALLMARK_IL6_JAK_STAT3_SIGNALING2.9e-9---0.0360.0123.5e-50.12-2.9e-30.2
PROGENy: EGFR7.6e-9---0.0413.7e-30.0026.3e-3-0.020.29
Showing 1 to 10 of 256 rows

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Cis-association

Associations between omics data of OLR1

BRCA-0.05proteinmRNASCNVmethylationCCRCC0.08proteinmRNASCNVmethylationCOAD0.15proteinmRNASCNVmethylationGBM0.290.220.05proteinmRNASCNVmethylationHNSCC0.14-0.19-0.05proteinmRNASCNVmethylationLSCC0.17-0.11-0.07proteinmRNASCNVmethylationLUAD-0.070.07-0.07proteinmRNASCNVmethylationOV-0.15proteinmRNASCNVmethylationPDAC0.11-0.160.10proteinmRNASCNVmethylationUCEC0.19-0.08-0.10proteinmRNASCNVmethylation

* The numbers are Spearman correlation coefficients and can be clicked to show the scatter plots. The color and size of the circles correlate with the coefficients.

Trans-association

Associations of the protein abundance of OLR1 and the protein abundance of other genes

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Signed p-values
Gene
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Gene set enrichment analysis

Submit genes and the common logarithm of the p-values of their association with to WebGestalt.