Basic information
- Full name
- SS nuclear autoantigen 1
- Ensembl
- ENSG00000176101.12
Protein product
- ENST00000322310.10 Primary ENSP00000313752.5 (2 phosphosites)
- ENST00000464553.2
Phosphosites on the primary protein product
Tumor and normal comparison
Signed p-values | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Data type | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
RNA | 0.013 | - | -0.34 | - | - | -3.1e-3 | 5.2e-6 | 8.5e-11 | - | -0.11 | - |
protein | -0.97 | - | 0.93 | -0.056 | - | -0.027 | -0.76 | 0.13 | 0.11 | -0.66 | 0.11 |
mRNA expression at gene level
Protein expression
Phenotype and mutation association
Manhattan plot summarizing associations of phenotypes and mutations across all cohorts and omics data types
Associations of the protein abundance of SSNA1 with phenotypes and mutations
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | |
xcell: T cell CD4+ Th2 | 3.8e-15 | 0.24 | 6.1e-4 | 2.1e-5 | 8.6e-3 | 0.017 | 0.034 | 0.6 | 6.8e-4 | 0.11 | 8.1e-4 | |
cibersort: T cell CD8+ | 5.7e-11 | 0.11 | 3.1e-5 | 0.15 | 0.51 | 2.3e-3 | 3.5e-3 | 0.18 | 0.2 | 0.045 | 0.025 | |
cibersort: Macrophage M1 | 1.8e-10 | 0.32 | 6.6e-6 | 0.27 | -0.61 | 3.8e-3 | 1.8e-4 | 0.017 | 0.01 | 0.46 | 0.082 | |
HALLMARK_G2M_CHECKPOINT | 9.3e-9 | 0.017 | 0.54 | 0.027 | 8.0e-4 | 0.08 | 0.47 | -0.078 | 3.8e-6 | 0.26 | 1.7e-3 | |
xcell: T cell CD8+ central memory | 2e-8 | 0.14 | 5.5e-5 | 0.022 | -0.95 | 0.042 | 0.051 | 1.2e-3 | 0.11 | 0.67 | 0.46 | |
xcell: T cell gamma delta | 5.2e-8 | 0.19 | 3.8e-4 | 0.074 | 7.7e-4 | 0.028 | 0.069 | 0.95 | 0.022 | -0.43 | 0.11 | |
xcell: Myeloid dendritic cell activated | 6.2e-8 | 0.14 | 6.3e-3 | 0.087 | -0.82 | 0.25 | 6.4e-3 | 8.9e-5 | 0.13 | 0.81 | 0.063 | |
HALLMARK_E2F_TARGETS | 6.8e-8 | 0.07 | 0.71 | 0.005 | 8.8e-4 | 0.22 | 0.59 | -0.2 | 6.7e-6 | 0.48 | 2.4e-3 | |
xcell: T cell CD8+ | 2.8e-7 | 0.11 | 1.1e-3 | 0.44 | 1.1e-3 | 0.022 | 0.046 | 6.8e-3 | -0.66 | 0.39 | -0.96 | |
HALLMARK_INTERFERON_GAMMA_RESPONSE | 2.8e-7 | 0.16 | 2.6e-4 | 0.02 | 0.84 | 0.14 | 0.035 | 1.6e-3 | 0.16 | 0.97 | 0.64 |
Cis-association
Associations between omics data of SSNA1
Trans-association
Associations of the protein abundance of SSNA1 and the protein abundance of other genes
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Gene | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | |
No matching records found |
Gene set enrichment analysis
Submit genes and the common logarithm of the p-values of their association with to WebGestalt.