Basic information

Full name
testin LIM domain protein
Ensembl
ENSG00000135269.18
Summary
Cancer-associated chromosomal changes often involve regions containing fragile sites. This gene maps to a commom fragile site on chromosome 7q31.2 designated FRA7G. This gene is similar to mouse Testin, a testosterone-responsive gene encoding a Sertoli cell secretory protein containing three LIM domains. LIM domains are double zinc-finger motifs that mediate protein-protein interactions between transcription factors, cytoskeletal proteins and signaling proteins. This protein is a negative regulator of cell growth and may act as a tumor suppressor. This scaffold protein may also play a role in cell adhesion, cell spreading and in the reorganization of the actin cytoskeleton. Multiple protein isoforms are encoded by transcript variants of this gene.[provided by RefSeq, Mar 2011]

Protein product

Phosphosites on the primary protein product
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Tumor and normal comparison

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Signed p-values
Data type
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
RNA1.9e-23-9.4e-24--1.7e-14-0.0870.61-7.3e-9-
protein2.1e-9-3.4e-18-5.7e-24-1.4e-18-1.5e-50.359.9e-38.8e-96.3e-3

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

mRNA expression at gene level
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC567891011121314log2(RSEM+1)tumornormal
Protein expression
BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC232425262728293031log2(MS1 intensity)tumornormal

* Mild outlier: filled circle; Extreme outlier: empty circle.

Phenotype and mutation association

Manhattan plot summarizing associations of phenotypes and mutations across all cohorts and omics data types

BRCACCRCCCOADGBMHNSCCLSCCLUADOVPDACUCEC024681012141618202224260-2-4-6-8-10-12-14-16-18-20-22-24-26Pan-cancer02468101214161820220-2-4-6-8-10-12-14-16-18-20-22proteinRNASCNVclinicalpathwaycell typegenomicmutation-log10 of P-value

* Data points of significant associations above and below the dotted lines can be hovered to show the phenotype.

Associations of the protein abundance of TES with phenotypes and mutations

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Signed p-values
Phenotype
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
PROGENy: TGFb1.4e-211.1e-60.24.3e-42.2e-160.134.4e-10-0.6-0.320.0153.2e-4
HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION1.8e-211.1e-6-0.943.5e-32.2e-160.0222.2e-80.16-0.470.0562.2e-4
HALLMARK_KRAS_SIGNALING_UP4.6e-201.6e-9-0.296.0e-52.2e-161.4e-33.4e-80.028-0.79-0.360.036
HALLMARK_UV_RESPONSE_DN7.7e-201.5e-40.747.7e-32.2e-160.0222.2e-80.290.8712.2e-6
HALLMARK_APICAL_JUNCTION5.1e-188.9e-70.450.0734e-140.769.1e-70.014-0.620.0826.5e-4
ESTIMATE: StromalScore2.7e-171.5e-5-0.821.9e-42.2e-160.0699.8e-90.51-0.170.656.4e-4
HALLMARK_TGF_BETA_SIGNALING4.2e-159.9e-60.814.1e-32.5e-70.0141.1e-80.29-0.420.0340.11
HALLMARK_COAGULATION2.3e-131.6e-4-0.0772.8e-42.2e-161.8e-41.1e-60.52-0.46-0.0780.01
ESTIMATE: ESTIMATEScore5e-131.0e-4-0.322.3e-32.2e-160.0466.1e-70.19-0.37-0.570.062
PROGENy: TNFa5.3e-121.1e-6-0.230.122.2e-160.0318.2e-50.220.61-0.660.33
Showing 1 to 10 of 256 rows

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Cis-association

Associations between omics data of TES

BRCA0.830.100.17proteinmRNASCNVmethylationCCRCC0.33-0.120.24-0.060.280.11proteinmRNASCNVmethylationCOAD0.590.210.54proteinmRNASCNVmethylationGBM0.89-0.26-0.31-0.30-0.330.32proteinmRNASCNVmethylationHNSCC0.82-0.000.380.000.41-0.15proteinmRNASCNVmethylationLSCC0.830.060.16-0.020.29-0.10proteinmRNASCNVmethylationLUAD0.620.010.430.070.55-0.17proteinmRNASCNVmethylationOV0.780.240.37proteinmRNASCNVmethylationPDAC0.750.080.240.060.51-0.10proteinmRNASCNVmethylationUCEC0.660.130.04-0.100.16-0.10proteinmRNASCNVmethylation

* The numbers are Spearman correlation coefficients and can be clicked to show the scatter plots. The color and size of the circles correlate with the coefficients.

Trans-association

Associations of the protein abundance of TES and the protein abundance of other genes

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Signed p-values
Gene
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots. The matrix icons in each row can be clicked to show a heatmap summary of associations across all cohorts and omics. The rows in the table can be expanded to show results from other omics.

Gene set enrichment analysis

Submit genes and the common logarithm of the p-values of their association with to WebGestalt.