- PDK4:
- pyruvate dehydrogenase kinase 4
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S13 | FVLRSAGSLNGAGLV | 2 | 35 | - | - | - | - | - | - | - | - | - | - | - | - | 9 | 8 | - | - | 14 | 4 | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S13 | FVLRSAGSLNGAGLV | - | - | - | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
xcell: Hematopoietic stem cell | S13 | 5.4e-4 | - | - | - | - | - | - | - | - | 5.4e-4 | - |
HALLMARK_KRAS_SIGNALING_DN | S13 | 0.01 | - | - | - | - | - | - | - | - | 0.01 | - |
PROGENy: Androgen | S13 | 0.016 | - | - | - | - | - | - | - | - | 0.016 | - |
cibersort: T cell CD4+ memory resting | S13 | 0.037 | - | - | - | - | - | - | - | - | 0.037 | - |
HALLMARK_ESTROGEN_RESPONSE_EARLY | S13 | 0.048 | - | - | - | - | - | - | - | - | 0.048 | - |
HALLMARK_MYOGENESIS | S13 | 0.084 | - | - | - | - | - | - | - | - | 0.084 | - |
cibersort: Mast cell activated | S13 | 0.09 | - | - | - | - | - | - | - | - | 0.09 | - |
PROGENy: p53 | S13 | 0.1 | - | - | - | - | - | - | - | - | 0.1 | - |
xcell: T cell CD4+ central memory | S13 | 0.1 | - | - | - | - | - | - | - | - | 0.1 | - |
cibersort: B cell memory | S13 | 0.1 | - | - | - | - | - | - | - | - | 0.1 | - |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
CAMK1 | S13 | 3.8e-3 | - | - | - | - | - | - | - | - | 3.8e-3 | - |
PXK | S13 | 0.011 | - | - | - | - | - | - | - | - | 0.011 | - |
DCLK1 | S13 | 0.012 | - | - | - | - | - | - | - | - | 0.012 | - |
PDGFRA | S13 | 0.019 | - | - | - | - | - | - | - | - | 0.019 | - |
STK33 | S13 | 0.022 | - | - | - | - | - | - | - | - | 0.022 | - |
CAMK2B | S13 | 0.026 | - | - | - | - | - | - | - | - | 0.026 | - |
MYLK | S13 | 0.026 | - | - | - | - | - | - | - | - | 0.026 | - |
KALRN | S13 | 0.027 | - | - | - | - | - | - | - | - | 0.028 | - |
WNK2 | S13 | 0.029 | - | - | - | - | - | - | - | - | 0.029 | - |
MST1R | S13 | 0.032 | - | - | - | - | - | - | - | - | 0.032 | - |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
PFKFB3 | S13 | -2.1e-3 | - | - | - | - | - | - | - | - | -2.1e-3 | - |
PLPP6 | S13 | -2.5e-3 | - | - | - | - | - | - | - | - | -2.5e-3 | - |
PTPN11 | S13 | -3.5e-3 | - | - | - | - | - | - | - | - | -3.5e-3 | - |
PTPN6 | S13 | -5.6e-3 | - | - | - | - | - | - | - | - | -5.6e-3 | - |
TIMM50 | S13 | -8.4e-3 | - | - | - | - | - | - | - | - | -8.4e-3 | - |
FIG4 | S13 | -8.9e-3 | - | - | - | - | - | - | - | - | -8.9e-3 | - |
PTPN7 | S13 | -0.022 | - | - | - | - | - | - | - | - | -0.022 | - |
PGAM5 | S13 | -0.024 | - | - | - | - | - | - | - | - | -0.024 | - |
PTPN1 | S13 | -0.026 | - | - | - | - | - | - | - | - | -0.026 | - |
ACP5 | S13 | -0.042 | - | - | - | - | - | - | - | - | -0.042 | - |