Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1a6a chain C
1icf chain I
1icf chain J
1iie chain A
1iie chain B
1iie chain C
1l3h chain A
1muj chain C
3pdo chain C
3pgc chain C
3pgc chain F
3pgd chain C
3pgd chain F
3qxa chain C
3qxa chain F
3qxd chain C
3qxd chain F
4aen chain C
4ah2 chain B
4x5w chain C
5ksu chain C
5ksu chain F
5ksv chain C
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S8 MHRRRSRS CREDQKP 9 1129 50 - 91 68 - - 72 - 92 53 108 99 110 101 35 8 100 41 83 18 S25 DDQRDLIS NNEQLPM 9 950 6 - 62 42 - - 46 - 102 59 103 95 102 93 83 19 18 7 95 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S8 MHRRRSRS CREDQKP -0.01 - 1.7e-14 - - 0.68 -3.2e-28 0.45 - 8.9e-9 -0.92 S25 DDQRDLIS NNEQLPM -6.4e-11 - 3.8e-6 - - -1.2e-3 -3.9e-24 -1.3e-8 -9.4e-3 - 0.3
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S8
S25
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S8 S25 protein RNA SCNV methylation CCRCC S8 S25 protein RNA SCNV methylation COAD S8 S25 protein RNA SCNV methylation GBM S8 S25 protein RNA SCNV methylation HNSCC S8 S25 protein RNA SCNV methylation LSCC S8 S25 protein RNA SCNV methylation LUAD S8 S25 protein RNA SCNV methylation OV S8 S25 protein RNA SCNV methylation PDAC S8 S25 protein RNA SCNV methylation UCEC S8 S25 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S8
S25
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S8
S25
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.