RPS5: ribosomal protein S5
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4ug0 chain SF
4v6x chain AF
5a2q chain F
5aj0 chain BF
5flx chain F
5lks chain SF
5oa3 chain F
5t2c chain As
5vyc chain F1
5vyc chain F2
5vyc chain F3
5vyc chain F4
5vyc chain F5
5vyc chain F6
6fec chain U
6g18 chain F
6g4s chain F
6g4w chain F
6g51 chain F
6g53 chain F
6g5h chain F
6g5i chain F
6ip5 chain 2r
6ip6 chain 2r
6ip8 chain 2r
6ole chain SF
6olf chain SF
6olg chain BF
6oli chain SF
6olz chain BF
6om0 chain SF
6om7 chain SF
6qzp chain SF
6xa1 chain SF
6y0g chain SF
6y2l chain SF
6y57 chain SF
6ybs chain V
6z6l chain SF
6z6m chain SF
6z6n chain SF
6zlw chain K
6zm7 chain SF
6zme chain SF
6zmi chain SF
6zmo chain SF
6zmt chain K
6zmw chain V
6zn5 chain K
6zoj chain F
6zol chain F
6zon chain e
6zp4 chain e
6zuo chain F
6zv6 chain F
6zvh chain F
6zvj chain e
6zxd chain F
6zxe chain F
6zxf chain F
6zxg chain F
6zxh chain F
7a09 chain e
7k5i chain F
7mq8 chain L5
7mq9 chain L5
7mqa chain L5
7qp6 chain V
7qp7 chain V
7tql chain K
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S52 YAKYLPHS AGRYAAK 9 349 9 - 16 16 6 3 18 - 55 31 58 52 27 24 - - 17 6 11 - S75 IVERLTNS MMMHGRN 1 27 - - - - - - - - - - - - - - - - - - 22 5 S142 RRQAVDVS PLRRVNQ 10 727 44 - 12 12 44 37 18 - 99 54 89 80 58 54 51 10 14 6 41 4 S185 INAAKGSS NSYAIKK 5 193 - - 9 8 - - - - 34 20 - - 31 28 - - 27 8 26 2 S187 AAKGSSNS YAIKKKD 2 110 - - - - - - - - 62 37 - - - - - - 7 4 - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S52 YAKYLPHS AGRYAAK 8.7e-15 - - - - 1.4e-4 1e-13 0.028 - - - S75 IVERLTNS MMMHGRN - - - - - - - - - - - S142 RRQAVDVS PLRRVNQ 1.2e-45 - - 9.1e-4 - 2.8e-13 4.1e-25 1.3e-12 2.6e-4 - - S185 INAAKGSS NSYAIKK 4.1e-3 - - - - -0.66 - 6.9e-6 - - - S187 AAKGSSNS YAIKKKD 8.9e-7 - - - - 8.9e-7 - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S52
S75
S142
S185
S187
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S52 S75 S142 S185 S187 protein RNA SCNV methylation CCRCC S52 S75 S142 S185 S187 protein RNA SCNV methylation COAD S52 S75 S142 S185 S187 protein RNA SCNV methylation GBM S52 S75 S142 S185 S187 protein RNA SCNV methylation HNSCC S52 S75 S142 S185 S187 protein RNA SCNV methylation LSCC S52 S75 S142 S185 S187 protein RNA SCNV methylation LUAD S52 S75 S142 S185 S187 protein RNA SCNV methylation OV S52 S75 S142 S185 S187 protein RNA SCNV methylation PDAC S52 S75 S142 S185 S187 protein RNA SCNV methylation UCEC S52 S75 S142 S185 S187 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S52
S75
S142
S185
S187
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S52
S75
S142
S185
S187
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.