Protein: ENSP00000204961
Gene: EFNB1

LinkedOmicsKB © 2022-2023 Zhang Lab

EFNB1:
ephrin B1

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S205SRGSLGDSDGKHETV19------------54------
S281QQRAAALSLSTLASP5354----708282-------133177719
S283RAAALSLSTLASPKG1054826-88707373-492538361717713414457
T284AAALSLSTLASPKGG6105--1716----6415141087---53
S287LSLSTLASPKGGSGT7287----12159-9153109--268177264
S292LASPKGGSGTAGTEP103039-54273544-12710954223937718
S300GTAGTEPSDIIIPLR6115--98--9-26181513--71--72
Y313LRTTENNYCPHYEKV336----108----54--72----
Y317ENNYCPHYEKVSGDY252----2115--------115----
Showing 1 to 9 of 9 rows

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S205SRGSLGDSDGKHETV-----------
S281QQRAAALSLSTLASP-2.3e-17---2.4e-17-------
S283RAAALSLSTLASPKG-6.9e-10---6.1e-19--0.77-6.5e-4--0.8-
T284AAALSLSTLASPKGG-----------
S287LSLSTLASPKGGSGT-0.049-----0.049-----
S292LASPKGGSGTAGTEP-0.07---0.011-------0.98
S300GTAGTEPSDIIIPLR0.86----0.86-----
Y313LRTTENNYCPHYEKV-----------
Y317ENNYCPHYEKVSGDY4.8e-3--4.7e-3-------
Showing 1 to 9 of 9 rows

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylationCCRCCS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylationCOADS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylationGBMS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylationHNSCCS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylationLSCCS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylationLUADS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylationOVS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylationPDACS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylationUCECS205S281S283T284S287S292S300Y313Y317proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.