Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1n3u chain A
1n3u chain B
1n45 chain A
1n45 chain B
1ni6 chain A
1ni6 chain B
1ni6 chain C
1ni6 chain D
1oyk chain A
1oyk chain B
1oyl chain A
1oyl chain B
1oze chain A
1oze chain B
1ozl chain A
1ozl chain B
1ozr chain A
1ozr chain B
1ozw chain A
1ozw chain B
1s13 chain A
1s13 chain B
1s8c chain A
1s8c chain B
1s8c chain C
1s8c chain D
1t5p chain A
1t5p chain B
1twn chain A
1twn chain B
1twr chain A
1twr chain B
1xjz chain A
1xjz chain B
1xk0 chain A
1xk0 chain B
1xk1 chain A
1xk1 chain B
1xk2 chain A
1xk2 chain B
1xk3 chain A
1xk3 chain B
3czy chain A
3czy chain B
3hok chain A
3hok chain B
3k4f chain A
3k4f chain B
3tgm chain A
3tgm chain B
4wd4 chain A
4wd4 chain B
4wd4 chain C
4wd4 chain D
5btq chain A
5btq chain B
6eha chain A
6eha chain B
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S160 KALDLPSS GEGLAFF 1 24 - - 16 8 - - - - - - - - - - - - - - - - S229 THDTKDQS PSRAPGL 10 1366 72 - 82 62 93 95 99 - 103 60 93 85 105 97 70 16 85 36 95 18 S241 PGLRQRAS NKVQDSA 1 26 26 - - - - - - - - - - - - - - - - - - - T252 QDSAPVET PRGKPPL 5 70 - - 16 7 - - 9 - 13 7 5 5 - - 5 3 - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S160 KALDLPSS GEGLAFF - - - - - - - - - - - S229 THDTKDQS PSRAPGL 0.011 - 4.4e-13 -0.017 - 1.2e-5 -0.022 0.7 0.96 3.2e-4 -1.4e-4 S241 PGLRQRAS NKVQDSA - - - - - - - - - - - T252 QDSAPVET PRGKPPL - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S160
S229
S241
T252
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S160 S229 S241 T252 protein RNA SCNV methylation CCRCC S160 S229 S241 T252 protein RNA SCNV methylation COAD S160 S229 S241 T252 protein RNA SCNV methylation GBM S160 S229 S241 T252 protein RNA SCNV methylation HNSCC S160 S229 S241 T252 protein RNA SCNV methylation LSCC S160 S229 S241 T252 protein RNA SCNV methylation LUAD S160 S229 S241 T252 protein RNA SCNV methylation OV S160 S229 S241 T252 protein RNA SCNV methylation PDAC S160 S229 S241 T252 protein RNA SCNV methylation UCEC S160 S229 S241 T252 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S160
S229
S241
T252
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S160
S229
S241
T252
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.