- MCM5:
- minichromosome maintenance complex component 5
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S315 | RSFAGAVSPQEEEEF | 8 | 143 | 8 | - | 4 | 4 | - | - | 17 | - | 21 | 14 | 14 | 14 | - | - | 12 | 4 | 5 | 2 | 13 | 11 |
T347 | APSIFGGTDMKKAIA | 1 | 6 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5 | 1 | - | - |
T509 | DNIDFMPTILSRFDM | 1 | 8 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 7 | 1 | - | - | - | - |
S605 | RDSDRRSSIPITVRQ | 3 | 59 | - | - | 8 | 8 | - | - | - | - | 24 | 11 | - | - | - | - | 7 | 1 | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S315 | RSFAGAVSPQEEEEF | 2.0e-4 | - | - | - | - | 2.0e-4 | - | - | - | - | - |
T347 | APSIFGGTDMKKAIA | - | - | - | - | - | - | - | - | - | - | - |
T509 | DNIDFMPTILSRFDM | - | - | - | - | - | - | - | - | - | - | - |
S605 | RDSDRRSSIPITVRQ | 0.9 | - | - | - | - | 0.9 | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
HALLMARK_E2F_TARGETS | S315 | 8.8e-6 | - | - | - | 4.7e-4 | 0.32 | 7.1e-4 | - | 0.13 | - | 0.59 |
HALLMARK_G2M_CHECKPOINT | S315 | 1.8e-5 | - | - | - | 4.2e-3 | 0.15 | 0.006 | - | 0.25 | - | 0.17 |
HALLMARK_DNA_REPAIR | S315 | 8.1e-5 | - | - | - | 0.18 | 0.2 | 0.015 | - | 1.7e-3 | - | 0.54 |
Tumor Purity (WGS) | S315 | 1.7e-4 | - | - | - | 0.034 | 0.11 | 4.4e-4 | - | - | - | 0.8 |
xcell: T cell CD4+ Th1 | S315 | 3.0e-4 | - | - | - | 0.27 | 0.078 | 0.012 | - | 0.094 | - | 0.3 |
chromosomal instability | S315 | 3.7e-4 | - | - | - | 0.52 | 0.59 | 3.3e-4 | - | 0.17 | - | 0.071 |
HALLMARK_MYC_TARGETS_V2 | S315 | 6.1e-4 | - | - | - | 0.18 | 0.16 | 0.084 | - | 0.035 | - | 0.27 |
Tumor Purity (ABSOLUTE) | S315 | 1.1e-3 | - | - | - | 0.021 | 0.67 | 1.4e-3 | - | 0.35 | - | 0.67 |
KINASE-PSP_CK2A1/CSNK2A1 | S315 | 1.3e-3 | - | - | - | 3.4e-3 | 0.5 | 0.032 | - | 0.62 | - | 0.35 |
KINASE-PSP_GSK3B | S315 | 4.9e-3 | - | - | - | 0.26 | 0.049 | 0.48 | - | - | - | 0.067 |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |