- PAPOLA:
- poly(A) polymerase alpha
Lollipop plot
Phosphosites location and occurrence
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S10 | FPVTTQGSQQTQPPQ | 2 | 24 | - | - | - | - | - | - | - | - | 12 | 5 | - | - | - | - | - | - | - | - | 5 | 2 |
S24 | QKHYGITSPISLAAP | 10 | 1304 | 73 | - | 67 | 54 | 87 | 75 | 99 | - | 101 | 59 | 89 | 81 | 92 | 85 | 75 | 18 | 102 | 42 | 87 | 18 |
S27 | YGITSPISLAAPKET | 1 | 9 | 9 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
S509 | LQKKKKHSTEGVKLT | 1 | 9 | - | - | - | - | - | - | 9 | - | - | - | - | - | - | - | - | - | - | - | - | - |
S526 | NDSSLDLSMDSDNSM | 4 | 61 | 35 | - | 4 | 4 | 4 | 5 | - | - | - | - | - | - | 5 | 4 | - | - | - | - | - | - |
S529 | SLDLSMDSDNSMSVP | 3 | 72 | - | - | 8 | 8 | 9 | 9 | - | - | - | - | - | - | - | - | - | - | - | - | 24 | 14 |
S532 | LSMDSDNSMSVPSPT | 3 | 68 | - | - | 8 | 8 | 4 | 5 | - | - | - | - | - | - | - | - | - | - | - | - | 36 | 7 |
S534 | MDSDNSMSVPSPTSA | 2 | 22 | - | - | 5 | 4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 11 | 2 |
S537 | DNSMSVPSPTSATKT | 10 | 1080 | 88 | - | 30 | 28 | 61 | 56 | 90 | - | 79 | 46 | 98 | 91 | 100 | 93 | 30 | 4 | 54 | 19 | 95 | 18 |
S545 | PTSATKTSPLNSSGS | 9 | 975 | 13 | - | - | - | 92 | 96 | 91 | - | 36 | 20 | 78 | 72 | 71 | 64 | 76 | 17 | 96 | 40 | 95 | 18 |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S10 | FPVTTQGSQQTQPPQ | - | - | - | - | - | - | - | - | - | - | - |
S24 | QKHYGITSPISLAAP | 2.3e-33 | - | -1.6e-8 | 3.2e-23 | - | 4.8e-11 | 1.3e-26 | 2.8e-28 | 1.7e-4 | -5.8e-8 | 1.6e-3 |
S27 | YGITSPISLAAPKET | - | - | - | - | - | - | - | - | - | - | - |
S509 | LQKKKKHSTEGVKLT | - | - | - | - | - | - | - | - | - | - | - |
S526 | NDSSLDLSMDSDNSM | - | - | - | - | - | - | - | - | - | - | - |
S529 | SLDLSMDSDNSMSVP | 0.5 | - | - | - | - | - | - | - | - | - | 0.5 |
S532 | LSMDSDNSMSVPSPT | - | - | - | - | - | - | - | - | - | - | - |
S534 | MDSDNSMSVPSPTSA | - | - | - | - | - | - | - | - | - | - | - |
S537 | DNSMSVPSPTSATKT | 4e-11 | - | -0.026 | 0.99 | - | 0.016 | 6.1e-13 | 8.8e-10 | - | 0.058 | 0.04 |
S545 | PTSATKTSPLNSSGS | 4.4e-26 | - | - | 5e-10 | - | 1.9e-4 | 1.6e-24 | 3.6e-16 | 0.85 | -4.8e-4 | 3.4e-3 |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |