Protein: ENSP00000216373
Gene: SOS2

LinkedOmicsKB © 2022-2023 Zhang Lab

SOS2:
SOS Ras/Rho guanine nucleotide exchange factor 2

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S1035KSTFSLKSPGIRPNT7536--3929--90-573545414440--4719455
S1047PNTGRHGSTSGTLRG1086925-2112557090-38237469888035756258318
S1128VLLPHSKSFFSSCGS164------64-------------
S1132HSKSFFSSCGSLHKL831856---549-754223222319276--52
S1135SFFSSCGSLHKLSEE81368-----36-722016971345252
S1202AFDGPLHSPPPPPPR333----54--------153--6-
S1260STCPNSPSTPPSTPS199-------------------
T1261TCPNSPSTPPSTPSP469--54--18---55------284
S1267STPPSTPSPRVPRRC588------27---5554--105225
S1298PVPPRQNSSPHLPKL584----9935-----4471--132
Showing 1 to 10 of 13 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S1035KSTFSLKSPGIRPNT0.37--0.31--0.8-0.680.3-0.03-
S1047PNTGRHGSTSGTLRG0.44-0.19-0.13--0.35-9.1e-51.1e-5-5.2e-4-0.43
S1128VLLPHSKSFFSSCGS-----------
S1132HSKSFFSSCGSLHKL0.3----0.083-0.0640.054---
S1135SFFSSCGSLHKLSEE-0.077------0.077----
S1202AFDGPLHSPPPPPPR-----------
S1260STCPNSPSTPPSTPS-----------
T1261TCPNSPSTPPSTPSP-----------
S1267STPPSTPSPRVPRRC-----------
S1298PVPPRQNSSPHLPKL-----------
Showing 1 to 10 of 13 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylationCCRCCS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylationCOADS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylationGBMS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylationHNSCCS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylationLSCCS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylationLUADS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylationOVS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylationPDACS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylationUCECS1035S1047S1128S1132S1135S1202S1260T1261S1267S1298S1299S1315T1330proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

Loading, please wait
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.