PSMD10: proteasome 26S subunit, non-ATPase 10
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1qym chain A
1tr4 chain A
1uoh chain A
4nik chain A
5vhf chain G
5vhh chain G
5vhi chain G
5vhj chain G
5vhm chain G
5vhn chain G
5vho chain G
5vhp chain G
5vhq chain G
5vhr chain G
7vo6 chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T108 AVNQNGCT PLHYAAS 3 37 18 - - - - - - - 6 3 5 5 - - - - - - - - S115 TPLHYAAS KNRHEIA 2 74 - - - - - - 36 - - - - - - - - - - - 29 9
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T108 AVNQNGCT PLHYAAS - - - - - - - - - - - S115 TPLHYAAS KNRHEIA - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T108
S115
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T108 S115 protein RNA SCNV methylation CCRCC T108 S115 protein RNA SCNV methylation COAD T108 S115 protein RNA SCNV methylation GBM T108 S115 protein RNA SCNV methylation HNSCC T108 S115 protein RNA SCNV methylation LSCC T108 S115 protein RNA SCNV methylation LUAD T108 S115 protein RNA SCNV methylation OV T108 S115 protein RNA SCNV methylation PDAC T108 S115 protein RNA SCNV methylation UCEC T108 S115 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T108
S115
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T108
S115
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.