PDAP1:
PDGFA associated protein 1

Lollipop plot

Phosphosites location and occurrence

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Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T18KGRARQYTSPEEIDA92136---10843-6314131213531035113
S19GRARQYTSPEEIDAQ1082289-5745575162-53296559585139114719273
S57DPKKEKKSLDSDESE1079225-75617263-108616055211971105446018
S60KEKKSLDSDESEDEE1073728-87908981-603335291213751854226518
S63KSLDSDESEDEEDDY101515121-103809710099-1045810898105976815105449518
Y70SEDEEDDYQQKRKGV134------------1717------
T97AQTTKKVTQLDLDGP214----------------41-9
S170AKDDATLSGKRMQSL975149-2218--63-56325549928527789375218
S176LSGKRMQSLSLNK__101292113-8260273599-95569891106976214101439518
S178GKRMQSLSLNK____10109577-7957515699-915354476965771768288918
Showing 1 to 10 of 10 rows

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T18KGRARQYTSPEEIDA-0.089----------0.089
S19GRARQYTSPEEIDAQ9.3e-6-2e-89.1e-4--0.590.0174.9e-6-0.026-0.16-
S57DPKKEKKSLDSDESE1e-16-5.3e-7--5.0e-51.1e-141.4e-5--1.1e-101.7e-8
S60KEKKSLDSDESEDEE6e-20--1.1e-22-2.0e-49.5e-8--0.16-0.688.1e-8
S63KSLDSDESEDEEDDY2.5e-23--1.7e-71.8e-16-1.2e-132.2e-233.2e-10-0.17-0.0116.6e-8
Y70SEDEEDDYQQKRKGV-----------
T97AQTTKKVTQLDLDGP-----------
S170AKDDATLSGKRMQSL-0.56-0.002--1.3e-5-0.980.31--8.6e-10-0.39
S176LSGKRMQSLSLNK__2.3e-11-6.9e-10-4.3e-4-2.7e-30.0752.3e-10-0.112.7e-12-0.81
S178GKRMQSLSLNK____-0.019-9.2e-5-4.5e-10-8.7e-3-1.7e-6-0.03-0.0094.6e-7-0.016
Showing 1 to 10 of 10 rows

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylationCCRCCT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylationCOADT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylationGBMT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylationHNSCCT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylationLSCCT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylationLUADT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylationOVT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylationPDACT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylationUCECT18S19S57S60S63Y70T97S170S176S178proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.