PPIF: peptidylprolyl isomerase F
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2bit chain X
2biu chain X
2z6w chain A
2z6w chain B
3qyu chain A
3r49 chain A
3r4g chain A
3r54 chain A
3r56 chain A
3r57 chain A
3r59 chain A
3rcf chain A
3rcg chain A
3rci chain X
3rck chain X
3rcl chain A
3rd9 chain X
3rda chain X
3rdb chain A
3rdc chain A
4j58 chain A
4j59 chain A
4j5a chain X
4j5b chain A
4j5c chain X
4j5d chain X
4j5e chain X
4o8h chain A
4o8i chain A
4xnc chain A
4zsc chain A
4zsd chain A
5a0e chain A
5a0e chain B
5cbt chain A
5cbu chain A
5cbv chain A
5cbw chain A
5ccn chain A
5ccq chain A
5ccr chain A
5ccs chain X
6r8l chain A
6r8o chain A
6r8w chain A
6r9s chain A
6r9u chain A
6r9x chain A
6ra1 chain A
6y3e chain A
6ybm chain A
6ybm chain B
6ybm chain C
7ogi chain A
7tgs chain X
7tgt chain X
7tgu chain X
7tgv chain X
7th1 chain X
7th6 chain A
7th7 chain A
7thc chain A
7thd chain A
7thf chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S34 ARACSKGS GDPSSSS 1 6 - - 3 3 - - - - - - - - - - - - - - - - S41 SGDPSSSS SSGNPLV 1 8 - - 4 4 - - - - - - - - - - - - - - - - S123 GGKSIYGS RFPDENF 5 92 - - 27 25 - - 9 - 6 4 - - - - 6 2 9 4 - - S189 KKIESFGS KSGRTSK 7 341 53 - 30 28 - - 18 - 58 32 15 13 13 12 - - 47 22 - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S34 ARACSKGS GDPSSSS - - - - - - - - - - - S41 SGDPSSSS SSGNPLV - - - - - - - - - - - S123 GGKSIYGS RFPDENF -9.6e-5 - -9.6e-5 - - - - - - - - S189 KKIESFGS KSGRTSK -3.5e-21 - -2.1e-15 - - -0.39 - - - -4e-14 -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S34
S41
S123
S189
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S34 S41 S123 S189 protein RNA SCNV methylation CCRCC S34 S41 S123 S189 protein RNA SCNV methylation COAD S34 S41 S123 S189 protein RNA SCNV methylation GBM S34 S41 S123 S189 protein RNA SCNV methylation HNSCC S34 S41 S123 S189 protein RNA SCNV methylation LSCC S34 S41 S123 S189 protein RNA SCNV methylation LUAD S34 S41 S123 S189 protein RNA SCNV methylation OV S34 S41 S123 S189 protein RNA SCNV methylation PDAC S34 S41 S123 S189 protein RNA SCNV methylation UCEC S34 S41 S123 S189 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S34
S41
S123
S189
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S34
S41
S123
S189
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.