Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1k3b chain A
1k3b chain B
1k3b chain C
2djf chain A
2djf chain B
2djf chain C
2djg chain A
2djg chain B
2djg chain C
3pdf chain A
4cdc chain A
4cdc chain B
4cdc chain C
4cdc chain D
4cdc chain E
4cdc chain F
4cdc chain G
4cdc chain H
4cdc chain I
4cdc chain J
4cdc chain K
4cdc chain L
4cdd chain A
4cdd chain B
4cdd chain C
4cdd chain D
4cdd chain E
4cdd chain F
4cde chain A
4cde chain B
4cde chain C
4cde chain D
4cde chain E
4cde chain F
4cdf chain A
4cdf chain B
4cdf chain C
4cdf chain D
4cdf chain E
4cdf chain F
4oel chain A
4oel chain B
4oem chain A
4oem chain B
6ic5 chain A
6ic5 chain B
6ic5 chain C
6ic6 chain A
6ic6 chain B
6ic6 chain C
6ic7 chain A
6ic7 chain B
6ic7 chain C
6rn6 chain A
6rn6 chain B
6rn6 chain C
6rn6 chain D
6rn6 chain E
6rn6 chain F
6rn7 chain A
6rn7 chain B
6rn7 chain C
6rn9 chain A
6rn9 chain B
6rn9 chain C
6rne chain A
6rne chain B
6rne chain C
6rni chain A
6rni chain B
6rni chain C
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T26 DGAVRCDT PANCTYL 1 8 - - 4 4 - - - - - - - - - - - - - - - - Y107 KWFAFFKY KEEGSKV 1 8 - - 4 4 - - - - - - - - - - - - - - - - T121 VTTYCNET MTGWVHD 2 18 - - - - - - - - 7 2 5 4 - - - - - - - - T123 TYCNETMT GWVHDVL 2 18 - - - - - - - - 7 2 5 4 - - - - - - - - S284 NSQTPILS PQEVVSC 1 7 - - - - - - - - - - - - - - - - - - 7 -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T26 DGAVRCDT PANCTYL - - - - - - - - - - - Y107 KWFAFFKY KEEGSKV - - - - - - - - - - - T121 VTTYCNET MTGWVHD - - - - - - - - - - - T123 TYCNETMT GWVHDVL - - - - - - - - - - - S284 NSQTPILS PQEVVSC - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T26
Y107
T121
T123
S284
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T26 Y107 T121 T123 S284 protein RNA SCNV methylation CCRCC T26 Y107 T121 T123 S284 protein RNA SCNV methylation COAD T26 Y107 T121 T123 S284 protein RNA SCNV methylation GBM T26 Y107 T121 T123 S284 protein RNA SCNV methylation HNSCC T26 Y107 T121 T123 S284 protein RNA SCNV methylation LSCC T26 Y107 T121 T123 S284 protein RNA SCNV methylation LUAD T26 Y107 T121 T123 S284 protein RNA SCNV methylation OV T26 Y107 T121 T123 S284 protein RNA SCNV methylation PDAC T26 Y107 T121 T123 S284 protein RNA SCNV methylation UCEC T26 Y107 T121 T123 S284 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T26
Y107
T121
T123
S284
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T26
Y107
T121
T123
S284
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.