Protein: ENSP00000229179
Gene: NUP107

LinkedOmicsKB © 2022-2023 Zhang Lab

NUP107:
nucleoporin 107

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S10RSGFGEISSPVIREA1058881-4139423919-188595333332863215339
S11SGFGEISSPVIREAE10126681-7453676899-9054888210293831972289518
S37KRVLLQASQDENFGN101412105-9574666090-1086210899105977616105448418
T45QDENFGNTTPRNQVI3359-------126--44------
T46DENFGNTTPRNQVIP953912---18963-11840375646681441178316
T55RNQVIPRTPSSFRQP10793105-47359946-4421686391851446122609
S57QVIPRTPSSFRQPFT614247-2120--9---141444-----9
S58VIPRTPSSFRQPFTP948359-88--18-7642403643404613144306
T64SSFRQPFTPTSRSLL1080065-8-201681-884989813433561345168818
T66FRQPFTPTSRSLLRQ199-------------------
Showing 1 to 10 of 16 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S10RSGFGEISSPVIREA4.5e-18--0.0281.1e-9--3e-144.4e-10-0.098-
S11SGFGEISSPVIREAE3.2e-17-9.2e-39.2e-5-0.0256.5e-45.2e-80.062.8e-8-0.24
S37KRVLLQASQDENFGN1.2e-4-1.7e-180.014-6e-8-6.2e-50.59-1.6e-30.35-0.92
T45QDENFGNTTPRNQVI-----------
T46DENFGNTTPRNQVIP0.014-----0.342.8e-80.95-1.5e-51.1e-3
T55RNQVIPRTPSSFRQP5.3e-16-0.16--0.186e-76.6e-10-2.7e-5-
S57QVIPRTPSSFRQPFT-0.71--0.71--------
S58VIPRTPSSFRQPFTP5.1e-7----8.8e-56.1e-90.47-0.67--
T64SSFRQPFTPTSRSLL0.019--0.26-0.0110.018-0.018-0.310.0030.54
T66FRQPFTPTSRSLLRQ-----------
Showing 1 to 10 of 16 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylationCCRCCS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylationCOADS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylationGBMS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylationHNSCCS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylationLSCCS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylationLUADS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylationOVS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylationPDACS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylationUCECS10S11S37T45T46T55S57S58T64T66S69T82S86S119S129S734proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.