RPS12: ribosomal protein S12
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4v6x chain AM
5a2q chain M
5aj0 chain BM
5flx chain M
5lks chain SM
5oa3 chain M
5t2c chain AM
5vyc chain M1
5vyc chain M2
5vyc chain M3
5vyc chain M4
5vyc chain M5
5vyc chain M6
6fec chain r
6g18 chain M
6g51 chain M
6g53 chain M
6g5h chain M
6g5i chain M
6ip5 chain 3J
6ip6 chain 3J
6ip8 chain 3J
6ole chain SM
6olf chain SM
6olg chain BM
6oli chain SM
6olz chain BM
6om0 chain SM
6om7 chain SM
6qzp chain SM
6xa1 chain SM
6y0g chain SM
6y57 chain Sf
6ybs chain m
6z6l chain SM
6z6m chain SM
6z6n chain SM
6zlw chain O
6zm7 chain SM
6zme chain SM
6zmi chain SM
6zmo chain SM
6zmt chain O
6zmw chain m
6zn5 chain O
6zoj chain M
6zol chain M
6zon chain v
6zp4 chain v
6zuo chain M
6zv6 chain M
6zvh chain M
6zvj chain v
6zxd chain M
6zxe chain M
6zxf chain M
6zxg chain M
6zxh chain M
7a09 chain v
7k5i chain M
7mq8 chain LA
7mq9 chain LA
7mqa chain LA
7qp6 chain m
7qp7 chain m
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S107 PRKVVGCS CVVVKDY 2 18 - - - - - - - - 5 4 5 4 - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S107 PRKVVGCS CVVVKDY - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S107
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S107 protein RNA SCNV methylation CCRCC S107 protein RNA SCNV methylation COAD S107 protein RNA SCNV methylation GBM S107 protein RNA SCNV methylation HNSCC S107 protein RNA SCNV methylation LSCC S107 protein RNA SCNV methylation LUAD S107 protein RNA SCNV methylation OV S107 protein RNA SCNV methylation PDAC S107 protein RNA SCNV methylation UCEC S107 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S107
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S107
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.