SKP1: S-phase kinase associated protein 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1fqv chain B
1fqv chain D
1fqv chain F
1fqv chain H
1fqv chain J
1fqv chain L
1fqv chain N
1fqv chain P
1fs1 chain B
1fs1 chain D
1fs2 chain B
1fs2 chain D
1ldk chain D
1p22 chain B
2ass chain A
2ast chain A
2e31 chain B
2e32 chain B
2e32 chain D
2ovp chain A
2ovq chain A
2ovr chain A
3l2o chain A
3wso chain B
4i6j chain C
5ibk chain A
5ibk chain D
5jh5 chain B
5k35 chain B
5v4b chain A
5vzt chain A
5vzt chain C
5vzu chain A
5vzu chain C
5xyl chain A
6bva chain C
6bva chain D
6byh chain A
6byh chain B
6byh chain G
6c16 chain A
6c16 chain B
6m90 chain B
6m91 chain B
6m92 chain B
6m93 chain B
6m94 chain B
6o60 chain D
6ttu chain S
6vcd chain C
6w66 chain A
6wcq chain A
6wnx chain B
6wnx chain E
6wnx chain H
7b5l chain S
7b5m chain S
7b5r chain S
7t1y chain A
7t1z chain A
7z8b chain S
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T131 ANMIKGKT PEEIRKT 10 1553 122 - 103 80 97 100 99 - 108 62 108 99 110 101 83 19 105 44 95 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T131 ANMIKGKT PEEIRKT 1e-51 - 1.9e-15 1e-13 - -0.072 8.6e-24 1.8e-26 0.027 0.14 1.5e-6
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T131
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T131 protein RNA SCNV methylation CCRCC T131 protein RNA SCNV methylation COAD T131 protein RNA SCNV methylation GBM T131 protein RNA SCNV methylation HNSCC T131 protein RNA SCNV methylation LSCC T131 protein RNA SCNV methylation LUAD T131 protein RNA SCNV methylation OV T131 protein RNA SCNV methylation PDAC T131 protein RNA SCNV methylation UCEC T131 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T131
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T131
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.