Protein: ENSP00000234038
Gene: PPP1R7

LinkedOmicsKB © 2022-2023 Zhang Lab

PPP1R7:
protein phosphatase 1 regulatory subunit 7

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S12RGAGQQQSQEMMEVD101482121-9976737099-1086210899106978319105449518
S24EVDRRVESEESGDEE10140982-76619710099-97561009197898319105449518
S27RRVESEESGDEEGKK101553122-103809710099-10862108991101018319105449518
S36DEEGKKHSSGIVADL235------18-----98------
S37EEGKKHSSGIVADLS10126198-9976171982-108621089910194339105448918
S44SGIVADLSEQSLKDG51888-----72-----54266--5116
S47VADLSEQSLKDGEER622317-44--99-----2320133--2911
S121ENLEELQSLRELDLY224--88------44--------
S177FLVNNKISKIENLSN2238-87----------------
S183ISKIENLSNLHQLQM226--44--18-------------
Showing 1 to 10 of 11 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S12RGAGQQQSQEMMEVD8.8e-21-2.2e-63.5e-9-5.9e-69.9e-115.1e-110.99-2.2e-30.2
S24EVDRRVESEESGDEE0.089--6.7e-60.42--0.0853.8e-32.1e-11-0.69-4.5e-53.2e-7
S27RRVESEESGDEEGKK-0.61--2.2e-50.32--3.5e-12-0.889.8e-140.095-8.3e-72.5e-6
S36DEEGKKHSSGIVADL-----------
S37EEGKKHSSGIVADLS-7.7e-15--2.6e-3---0.13-2.8e-23-5.5e-15-1.0e-61
S44SGIVADLSEQSLKDG3.9e-3---------3.9e-3
S47VADLSEQSLKDGEER4.8e-4------1.2e-3--0.09
S121ENLEELQSLRELDLY-----------
S177FLVNNKISKIENLSN-----------
S183ISKIENLSNLHQLQM-----------
Showing 1 to 10 of 11 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylationCCRCCS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylationCOADS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylationGBMS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylationHNSCCS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylationLSCCS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylationLUADS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylationOVS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylationPDACS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylationUCECS12S24S27S36S37S44S47S121S177S183S322proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.