- NCAPH:
- non-SMC condensin I complex subunit H
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S17 | ATMNNSSSETRGHPH | 1 | 16 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 12 | 4 |
S25 | ETRGHPHSASSPSER | 1 | 10 | - | - | - | - | - | - | - | - | 7 | 3 | - | - | - | - | - | - | - | - | - | - |
S27 | RGHPHSASSPSERVF | 4 | 25 | - | - | - | - | - | - | - | - | 6 | 4 | 4 | 1 | 3 | - | - | - | 5 | 2 | - | - |
S28 | GHPHSASSPSERVFP | 9 | 342 | 7 | - | - | - | 57 | 34 | 49 | - | 18 | 9 | 14 | 6 | 23 | 5 | 67 | 8 | 14 | 4 | 21 | 6 |
T49 | APLNIPGTPVLEDFP | 8 | 707 | 87 | - | - | - | 25 | 20 | 54 | - | 108 | 62 | 79 | 70 | 48 | 44 | - | - | 7 | 2 | 83 | 18 |
S70 | ERLQRRRSRVFDLQF | 4 | 150 | - | - | - | - | - | - | - | - | 59 | 31 | 10 | 10 | - | - | 29 | 6 | 3 | 2 | - | - |
S78 | RVFDLQFSTDSPRLL | 3 | 55 | - | - | - | - | - | - | 9 | - | - | - | 15 | 14 | 9 | 8 | - | - | - | - | - | - |
T79 | VFDLQFSTDSPRLLA | 2 | 18 | 9 | - | - | - | - | - | 9 | - | - | - | - | - | - | - | - | - | - | - | - | - |
S81 | DLQFSTDSPRLLASP | 5 | 127 | 16 | - | - | - | - | - | 19 | - | 10 | 7 | - | - | - | - | 30 | 9 | - | - | 36 | - |
S87 | DSPRLLASPSSRSID | 10 | 306 | 26 | - | 4 | 4 | 17 | 19 | 18 | - | 36 | 18 | 24 | 22 | 14 | 12 | 14 | 4 | 3 | 2 | 51 | 18 |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S17 | ATMNNSSSETRGHPH | - | - | - | - | - | - | - | - | - | - | - |
S25 | ETRGHPHSASSPSER | - | - | - | - | - | - | - | - | - | - | - |
S27 | RGHPHSASSPSERVF | - | - | - | - | - | - | - | - | - | - | - |
S28 | GHPHSASSPSERVFP | 3.2e-9 | - | - | 3.2e-9 | - | - | - | - | - | - | - |
T49 | APLNIPGTPVLEDFP | 8.1e-28 | - | - | 0.05 | - | 4.2e-7 | 6.4e-18 | 3.7e-5 | - | - | 3.0e-6 |
S70 | ERLQRRRSRVFDLQF | 2.5e-5 | - | - | - | - | 2.5e-5 | - | - | - | - | - |
S78 | RVFDLQFSTDSPRLL | - | - | - | - | - | - | - | - | - | - | - |
T79 | VFDLQFSTDSPRLLA | - | - | - | - | - | - | - | - | - | - | - |
S81 | DLQFSTDSPRLLASP | - | - | - | - | - | - | - | - | - | - | - |
S87 | DSPRLLASPSSRSID | 4.8e-10 | - | - | - | - | 2.1e-4 | 9.1e-7 | - | - | - | 0.03 |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |