Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1j8f chain A
1j8f chain B
1j8f chain C
3zgo chain A
3zgo chain B
3zgo chain C
3zgv chain A
3zgv chain B
4l3o chain A
4l3o chain B
4l3o chain C
4l3o chain D
4r8m chain A
4r8m chain B
4rmg chain A
4rmh chain A
4rmi chain A
4rmj chain A
4rmj chain B
4x3o chain A
4x3p chain A
4y6l chain A
4y6l chain B
4y6o chain A
4y6o chain B
4y6q chain A
4y6q chain B
4y6q chain C
4y6q chain D
5d7o chain A
5d7o chain B
5d7p chain A
5d7p chain B
5d7q chain A
5d7q chain B
5dy4 chain A
5dy5 chain A
5fyq chain A
5fyq chain B
5g4c chain A
5g4c chain B
5mar chain A
5mar chain B
5mat chain A
5mat chain C
5y0z chain A
5y0z chain B
5y5n chain A
5yql chain A
5yqm chain A
5yqn chain A
5yqo chain A
6l65 chain A
6l66 chain A
6l71 chain A
6l72 chain A
6nr0 chain A
6nr0 chain B
6qcn chain A
6qcn chain B
7bos chain A
7bot chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S23 KVQEAQDS DSDSEGG 9 883 104 - 34 24 37 35 9 - 88 53 80 72 97 87 - - 49 19 77 18 S25 QEAQDSDS DSEGGAA 10 444 9 - 12 12 42 39 73 - 11 8 39 36 16 16 6 2 49 19 48 7 S27 AQDSDSDS EGGAAGG 9 298 88 - 4 4 5 4 25 - 38 22 10 9 32 28 - - 5 1 21 2 S53 SQTLSLGS QKERLLD 3 140 - - 4 4 - - 99 - - - - - 17 16 - - - - - - S100 IPDFRSPS TGLYDNL 1 64 - - - - - - 64 - - - - - - - - - - - - - Y165 KGLLLRCY TQNIDTL 1 19 - - - - - - 19 - - - - - - - - - - - - - T166 GLLLRCYT QNIDTLE 1 19 - - - - - - 19 - - - - - - - - - - - - - S207 CRHEYPLS WMKEKIF 1 99 - - - - - - 99 - - - - - - - - - - - - - T218 EKIFSEVT PKCEDCQ 1 45 - - - - - - 45 - - - - - - - - - - - - - T280 ISKAPLST PRLLINK 1 45 - - - - - - 45 - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S23 KVQEAQDS DSDSEGG -3.1e-3 - -0.015 -9.5e-7 - 0.58 -0.34 -1.7e-7 - 0.071 7.6e-4 S25 QEAQDSDS DSEGGAA -0.16 - - -7.3e-8 - - 0.34 - - 0.044 - S27 AQDSDSDS EGGAAGG -1.3e-3 - - - - -0.41 - -2.0e-4 - - - S53 SQTLSLGS QKERLLD - - - - - - - - - - - S100 IPDFRSPS TGLYDNL - - - - - - - - - - - Y165 KGLLLRCY TQNIDTL - - - - - - - - - - - T166 GLLLRCYT QNIDTLE - - - - - - - - - - - S207 CRHEYPLS WMKEKIF - - - - - - - - - - - T218 EKIFSEVT PKCEDCQ - - - - - - - - - - - T280 ISKAPLST PRLLINK - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S23
S25
S27
S53
S100
Y165
T166
S207
T218
T280
S293
S364
S366
S368
S372
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation CCRCC S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation COAD S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation GBM S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation HNSCC S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation LSCC S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation LUAD S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation OV S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation PDAC S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation UCEC S23 S25 S27 S53 S100 Y165 T166 S207 T218 T280 S293 S364 S366 S368 S372 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S23
S25
S27
S53
S100
Y165
T166
S207
T218
T280
S293
S364
S366
S368
S372
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S23
S25
S27
S53
S100
Y165
T166
S207
T218
T280
S293
S364
S366
S368
S372
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.