Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1b68 chain A
1bz4 chain A
1ea8 chain A
1gs9 chain A
1h7i chain A
1le2 chain A
1le4 chain A
1lpe chain A
1nfn chain A
1nfo chain A
1oef chain A
1oeg chain A
1or2 chain A
1or3 chain A
2kc3 chain A
2kny chain A
2l7b chain A
6iwb chain A
6iwb chain C
6ncn chain A
6nco chain A
6v7m chain A
6v7m chain B
7fcr chain A
7fcs chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S40 RQQTEWQS GQRWELA 1 9 - - - - - - 9 - - - - - - - - - - - - - S147 VQAMLGQS TEELRVR 10 1401 113 - 103 80 41 39 99 - 98 55 108 99 110 101 83 19 100 40 95 18 T212 QGRVRAAT VGSLAGQ 1 8 - - 4 4 - - - - - - - - - - - - - - - - S215 VRAATVGS LAGQPLQ 2 36 - - - - - - 27 - - - - - - - - - - - - 9
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S40 RQQTEWQS GQRWELA - - - - - - - - - - - S147 VQAMLGQS TEELRVR -9.9e-34 - -7.1e-17 -7.9e-5 - -1.1e-7 -7e-20 -1.5e-11 -8.1e-7 2.8e-5 -0.98 T212 QGRVRAAT VGSLAGQ - - - - - - - - - - - S215 VRAATVGS LAGQPLQ - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S40
S147
T212
S215
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S40 S147 T212 S215 protein RNA SCNV methylation CCRCC S40 S147 T212 S215 protein RNA SCNV methylation COAD S40 S147 T212 S215 protein RNA SCNV methylation GBM S40 S147 T212 S215 protein RNA SCNV methylation HNSCC S40 S147 T212 S215 protein RNA SCNV methylation LSCC S40 S147 T212 S215 protein RNA SCNV methylation LUAD S40 S147 T212 S215 protein RNA SCNV methylation OV S40 S147 T212 S215 protein RNA SCNV methylation PDAC S40 S147 T212 S215 protein RNA SCNV methylation UCEC S40 S147 T212 S215 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S40
S147
T212
S215
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S40
S147
T212
S215
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.