Protein: ENSP00000258729
Gene: IGF2BP3

LinkedOmicsKB © 2022-2023 Zhang Lab

IGF2BP3:
insulin like growth factor 2 mRNA binding protein 3

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S180GLGQRGSSRQGSPGS84418-2617--62-975429272624--31598
S184RGSSRQGSPGSVSKQ10114985-4536383397-107609866106724111102419318
S187SRQGSPGSVSKQKPC4102------9---3024----51312
S243NAGAAEKSITILSTP224------------54----114
T249KSITILSTPEGTSAA6167--88----63403454--135374
S313TDTKITISPLQELTL18--------53----------
S481IKEENFVSPKEEVKL219----------5554------
S496EAHIRVPSFAAGRVI3128------27---2825------426
S518NELQNLSSAEVVVPR18------------------62
T528VVVPRDQTPDENDQV7419--88--36-452584745142--144226
Showing 1 to 10 of 11 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S180GLGQRGSSRQGSPGS1.3e-13-6.6e-3--2.1e-92.7e-70.34---
S184RGSSRQGSPGSVSKQ2.6e-49-0.0494.0e-6-5.1e-124.7e-229.2e-120.581.2e-144.1e-4
S187SRQGSPGSVSKQKPC1.4e-13-----1.4e-13----
S243NAGAAEKSITILSTP-----------
T249KSITILSTPEGTSAA3.7e-8-----3.7e-8----
S313TDTKITISPLQELTL-----------
S481IKEENFVSPKEEVKL-----------
S496EAHIRVPSFAAGRVI6.5e-5-----6.5e-5----
S518NELQNLSSAEVVVPR-----------
T528VVVPRDQTPDENDQV1.2e-30----1.6e-67.6e-244.2e-7---
Showing 1 to 10 of 11 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylationCCRCCS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylationCOADS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylationGBMS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylationHNSCCS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylationLSCCS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylationLUADS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylationOVS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylationPDACS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylationUCECS180S184S187S243T249S313S481S496S518T528S576proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.