RAC1: Rac family small GTPase 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1e96 chain A
1foe chain B
1foe chain D
1foe chain F
1foe chain H
1g4u chain R
1he1 chain C
1he1 chain D
1hh4 chain A
1hh4 chain B
1i4d chain D
1i4l chain D
1i4t chain D
1mh1 chain A
1ryf chain A
1ryf chain B
1ryh chain A
1ryh chain B
2fju chain A
2h7v chain A
2h7v chain B
2nz8 chain A
2p2l chain A
2p2l chain B
2p2l chain C
2rmk chain A
2vrw chain A
2wkp chain A
2wkq chain A
2wkr chain A
2yin chain C
2yin chain D
3b13 chain B
3b13 chain D
3bji chain C
3bji chain D
3ryt chain C
3sbd chain A
3sbd chain B
3sbe chain A
3su8 chain A
3sua chain A
3sua chain B
3sua chain C
3th5 chain A
3th5 chain B
4gzl chain A
4gzl chain B
4gzm chain A
4gzm chain B
4yon chain B
5fi0 chain B
5fi0 chain D
5fi0 chain F
5fi0 chain H
5hzh chain A
5n6o chain A
5n6o chain B
5o33 chain A
5qqd chain A
5qqe chain A
5qqf chain A
5qqg chain A
5qqh chain A
5qqi chain A
5qqj chain A
5qqk chain A
5qql chain A
5qqm chain A
5qqn chain A
5qu9 chain A
6agp chain A
6bc1 chain A
6bc1 chain B
6tgc chain C
6tgc chain F
6x1g chain B
6x1g chain D
7ajk chain BBB
7dpa chain B
7dpa chain E
7sj4 chain B
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T108 VRHHCPNT PIILVGT 1 8 - - 4 4 - - - - - - - - - - - - - - - - T135 KLKEKKLT PITYPQG 1 90 - - - - - - 90 - - - - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
T108 VRHHCPNT PIILVGT - - - - - - - - - - - T135 KLKEKKLT PITYPQG - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
T108
T135
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA T108 T135 protein RNA SCNV methylation CCRCC T108 T135 protein RNA SCNV methylation COAD T108 T135 protein RNA SCNV methylation GBM T108 T135 protein RNA SCNV methylation HNSCC T108 T135 protein RNA SCNV methylation LSCC T108 T135 protein RNA SCNV methylation LUAD T108 T135 protein RNA SCNV methylation OV T108 T135 protein RNA SCNV methylation PDAC T108 T135 protein RNA SCNV methylation UCEC T108 T135 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
T108
T135
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
T108
T135
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.