- CALCOCO2:
- calcium binding and coiled-coil domain 2
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S165 | ELKDSCISLQKQNSD | 1 | 6 | 6 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
S171 | ISLQKQNSDMQAELQ | 3 | 67 | - | - | 8 | - | - | - | 53 | - | - | - | - | - | - | - | - | - | - | - | 6 | - |
S238 | DQLQAQLSTQEKEME | 9 | 992 | 90 | - | 70 | 56 | - | - | 72 | - | 58 | 32 | 93 | 85 | 102 | 93 | 22 | 5 | 92 | 39 | 67 | 16 |
S271 | ENDHLFLSLTEQRKD | 1 | 9 | - | - | - | - | - | - | - | - | - | - | - | - | 5 | 4 | - | - | - | - | - | - |
S315 | FDLSKRLSENEIICN | 10 | 809 | 52 | - | 87 | 64 | 6 | 3 | 54 | - | 69 | 37 | 59 | 52 | 101 | 93 | 13 | 4 | 27 | 10 | 62 | 16 |
Y348 | ENSRLLSYMGLDFNS | 1 | 6 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4 | 2 | - | - |
S355 | YMGLDFNSLPYQVPT | 10 | 1106 | 79 | - | 98 | 76 | 75 | 77 | 46 | - | 96 | 56 | 98 | 89 | 110 | 101 | 18 | 6 | 41 | 19 | 10 | 11 |
S381 | LAYGNPYSGIQESSS | 1 | 9 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 8 | 1 | - | - | - | - |
S386 | PYSGIQESSSPSPLS | 2 | 31 | 22 | - | - | - | - | - | - | - | - | - | 5 | 4 | - | - | - | - | - | - | - | - |
S387 | YSGIQESSSPSPLSI | 5 | 147 | 6 | - | 45 | 34 | - | - | - | - | 12 | 7 | 5 | 4 | 18 | 16 | - | - | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S165 | ELKDSCISLQKQNSD | - | - | - | - | - | - | - | - | - | - | - |
S171 | ISLQKQNSDMQAELQ | - | - | - | - | - | - | - | - | - | - | - |
S238 | DQLQAQLSTQEKEME | -8.6e-7 | - | 0.12 | - | - | 0.88 | -1.5e-7 | -0.11 | - | -1.1e-4 | -2.4e-3 |
S271 | ENDHLFLSLTEQRKD | - | - | - | - | - | - | - | - | - | - | - |
S315 | FDLSKRLSENEIICN | -1.8e-3 | - | 8.0e-4 | - | - | -1.9e-5 | -0.047 | -4.7e-17 | - | 0.044 | 0.1 |
Y348 | ENSRLLSYMGLDFNS | - | - | - | - | - | - | - | - | - | - | - |
S355 | YMGLDFNSLPYQVPT | -2e-23 | - | 9.5e-5 | -8.9e-8 | - | -2.6e-8 | -7e-17 | -1.3e-14 | - | -0.17 | - |
S381 | LAYGNPYSGIQESSS | - | - | - | - | - | - | - | - | - | - | - |
S386 | PYSGIQESSSPSPLS | - | - | - | - | - | - | - | - | - | - | - |
S387 | YSGIQESSSPSPLSI | 1.5e-3 | - | 1.5e-3 | - | - | - | - | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |