MRPS27: mitochondrial ribosomal protein S27
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
3j9m chain AV
6nu2 chain AV
6nu3 chain AV
6rw4 chain V
6rw5 chain V
6vlz chain AV
6vmi chain AV
6zm5 chain AV
6zm6 chain AV
6zs9 chain AV
6zsa chain AV
6zsb chain AV
6zsc chain AV
6zsd chain AV
6zse chain AV
6zsg chain AV
7a5f chain V6
7a5g chain V6
7a5i chain V6
7a5k chain V6
7l08 chain AV
7og4 chain AV
7p2e chain V
7pnx chain V
7pny chain V
7pnz chain V
7po0 chain V
7po1 chain V
7po2 chain V
7po3 chain V
7qi4 chain AV
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S301 DGASEEQS QNDEDNQ 5 168 - - 45 36 16 11 27 - 11 5 9 8 - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S301 DGASEEQS QNDEDNQ -1.4e-4 - -1.4e-4 - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S301
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S301 protein RNA SCNV methylation CCRCC S301 protein RNA SCNV methylation COAD S301 protein RNA SCNV methylation GBM S301 protein RNA SCNV methylation HNSCC S301 protein RNA SCNV methylation LSCC S301 protein RNA SCNV methylation LUAD S301 protein RNA SCNV methylation OV S301 protein RNA SCNV methylation PDAC S301 protein RNA SCNV methylation UCEC S301 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S301
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S301
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.