EED: embryonic ectoderm development
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
3iiw chain A
3iiy chain A
3ij0 chain A
3ij1 chain A
3ijc chain A
3jpx chain A
3jzg chain A
3jzh chain A
3jzn chain A
3k26 chain A
3k27 chain A
4w2r chain E
4w2r chain F
4x3e chain A
5gsa chain A
5gsa chain B
5h13 chain A
5h14 chain A
5h14 chain B
5h15 chain A
5h15 chain B
5h17 chain A
5h19 chain A
5h24 chain A
5h24 chain B
5h25 chain A
5h25 chain B
5hyn chain B
5hyn chain G
5hyn chain L
5hyn chain R
5ij7 chain E
5ij7 chain F
5ij8 chain E
5ij8 chain F
5k0m chain A
5ls6 chain B
5ls6 chain E
5ls6 chain H
5ls6 chain K
5ttw chain A
5ttw chain C
5u5h chain A
5u5k chain A
5u5t chain A
5u5t chain B
5u62 chain A
5u62 chain B
5u69 chain A
5u6d chain A
5u8a chain A
5u8f chain A
5wg6 chain B
5wg6 chain D
5wp3 chain A
5wuk chain A
6b3w chain E
6b3w chain F
6c23 chain L
6c24 chain L
6lo2 chain A
6lo2 chain B
6sfb chain A
6sfb chain B
6sfc chain A
6sfc chain B
6u4y chain D
6u4y chain E
6u4y chain F
6v3x chain A
6v3y chain A
6w7f chain A
6w7g chain A
6wkr chain L
6yvi chain A
6yvi chain B
6yvj chain A
6yvj chain B
7kso chain B
7ksr chain B
7ktp chain B
7kxt chain A
7kxt chain B
7msb chain A
7msd chain A
7p3c chain A
7p3c chain B
7p3g chain A
7p3g chain B
7p3j chain A
7p3j chain B
7qjg chain A
7qjg chain B
7qju chain A
7qju chain B
7qk4 chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S29 KLSSDENS NPDLSGD 2 30 - - - - - - - - - - - - 4 5 - - - - 19 2 S34 ENSNPDLS GDENDDA 9 649 - - 20 20 36 34 58 - 56 30 83 65 75 68 6 1 26 12 41 18 S43 DENDDAVS IESGTNT 6 363 - - 54 48 15 12 - - 4 4 52 37 36 32 - - - - 60 9 S46 DDAVSIES GTNTERP 5 69 - - 4 4 - - 9 - - - 15 13 10 8 - - 4 2 - - T48 AVSIESGT NTERPDT 3 31 - - 4 4 - - - - - - - - - - - - 5 1 5 12 T50 SIESGTNT ERPDTPT 4 40 - - 4 4 6 3 - - - - - - - - - - 7 2 11 3 T55 TNTERPDT PTNTPNA 6 234 - - - - 19 17 53 - 11 4 15 11 - - - - 4 2 80 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S29 KLSSDENS NPDLSGD - - - - - - - - - - - S34 ENSNPDLS GDENDDA 1e-10 - -0.13 5.3e-3 - 3.6e-5 6.8e-12 0.046 - -0.57 6.8e-4 S43 DENDDAVS IESGTNT 1.2e-9 - 0.31 - - - 1.9e-7 1.7e-5 - - - S46 DDAVSIES GTNTERP - - - - - - - - - - - T48 AVSIESGT NTERPDT - - - - - - - - - - - T50 SIESGTNT ERPDTPT - - - - - - - - - - - T55 TNTERPDT PTNTPNA 0.43 - - - - - - - - - 0.43
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S29
S34
S43
S46
T48
T50
T55
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation CCRCC S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation COAD S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation GBM S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation HNSCC S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation LSCC S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation LUAD S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation OV S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation PDAC S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation UCEC S29 S34 S43 S46 T48 T50 T55 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S29
S34
S43
S46
T48
T50
T55
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S29
S34
S43
S46
T48
T50
T55
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.