BRD4: bromodomain containing 4
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2i8n chain A
2lsp chain B
2mjv chain B
2n3k chain A
2ncz chain A
2nd0 chain A
2nd1 chain A
2nnu chain B
2oss chain A
2ouo chain A
2yel chain A
2yem chain A
2yem chain B
3mxf chain A
3p5o chain A
3svf chain A
3svg chain A
3u5j chain A
3u5k chain A
3u5k chain B
3u5k chain C
3u5k chain D
3u5l chain A
3uvw chain A
3uvx chain A
3uvy chain A
3uw9 chain A
3uw9 chain B
3uw9 chain C
3uw9 chain D
3zyu chain A
3zyu chain B
4a9l chain A
4bjx chain A
4bw1 chain A
4bw2 chain A
4bw3 chain A
4bw4 chain A
4c66 chain A
4c67 chain A
4cfk chain A
4cfl chain A
4cl9 chain A
4clb chain A
4don chain A
4e96 chain A
4f3i chain A
4gpj chain A
4hbv chain A
4hbw chain A
4hbx chain A
4hby chain A
4hxk chain A
4hxl chain A
4hxm chain A
4hxn chain A
4hxo chain A
4hxp chain A
4hxr chain A
4hxs chain A
4ioo chain A
4ioq chain A
4ior chain A
4j0r chain A
4j0s chain A
4j3i chain A
4kv1 chain A
4kv1 chain B
4kv4 chain A
4lr6 chain A
4lrg chain A
4lyi chain A
4lys chain A
4lyw chain A
4lzr chain A
4lzs chain A
4men chain A
4meo chain A
4mep chain A
4meq chain A
4mr3 chain A
4mr4 chain A
4nqm chain A
4nr8 chain A
4nuc chain A
4nud chain A
4nue chain A
4o70 chain A
4o70 chain B
4o71 chain A
4o71 chain B
4o72 chain A
4o74 chain A
4o74 chain B
4o75 chain A
4o76 chain A
4o76 chain B
4o76 chain C
4o76 chain D
4o77 chain A
4o77 chain B
4o78 chain A
4o7a chain A
4o7b chain A
4o7c chain A
4o7e chain A
4o7e chain B
4o7f chain A
4o7f chain B
4ogi chain A
4ogi chain B
4ogj chain A
4ogj chain B
4pce chain A
4pci chain A
4ps5 chain A
4ps5 chain B
4qb3 chain A
4qr3 chain A
4qr4 chain A
4qr5 chain A
4qzs chain A
4uix chain A
4uix chain B
4uix chain C
4uiy chain A
4uiz chain A
4uyd chain A
4whw chain A
4wiv chain A
4x2i chain A
4xy9 chain A
4xya chain A
4yh3 chain A
4yh4 chain A
4z1q chain A
4z1q chain B
4z1s chain A
4z1s chain B
4z93 chain A
4zc9 chain A
4zw1 chain A
5a5s chain A
5a85 chain A
5acy chain A
5acy chain B
5ad2 chain A
5ad2 chain B
5ad3 chain A
5ad3 chain B
5bt4 chain A
5bt4 chain B
5bt4 chain C
5cfw chain A
5coi chain A
5cp5 chain A
5cpe chain A
5cqt chain A
5crm chain A
5crz chain A
5cs8 chain A
5ctl chain A
5cy9 chain A
5d0c chain A
5d24 chain A
5d25 chain A
5d26 chain A
5d3h chain A
5d3j chain A
5d3l chain A
5d3n chain A
5d3p chain A
5d3r chain A
5d3s chain A
5d3t chain A
5dlx chain A
5dlz chain A
5dw2 chain A
5dx4 chain A
5e0r chain A
5egu chain A
5egu chain B
5egu chain C
5egu chain D
5ei4 chain A
5eis chain A
5f5z chain A
5f60 chain A
5f61 chain A
5f61 chain B
5f62 chain A
5f63 chain A
5fbx chain A
5h21 chain A
5hcl chain A
5hls chain A
5hm0 chain A
5hq5 chain A
5hq6 chain A
5hq7 chain A
5i80 chain A
5i88 chain A
5igk chain A
5jwm chain A
5jwm chain B
5kdh chain A
5khm chain A
5khm chain B
5kj0 chain A
5ku3 chain A
5lj1 chain A
5lj2 chain A
5lrq chain A
5luu chain A
5m39 chain A
5m39 chain B
5m3a chain A
5mkz chain A
5mli chain A
5n2m chain A
5nnc chain A
5nnc chain B
5nnd chain A
5nnd chain B
5nne chain A
5nnf chain A
5nng chain A
5o97 chain A
5ovb chain A
5ovb chain B
5owm chain A
5oww chain A
5oww chain B
5oww chain C
5oww chain D
5s9p chain A
5s9p chain B
5s9p chain D
5s9p chain E
5s9q chain A
5s9q chain B
5s9q chain D
5s9q chain E
5s9r chain A
5t35 chain A
5t35 chain E
5ti2 chain A
5ti3 chain A
5ti4 chain A
5ti5 chain A
5ti6 chain A
5ti7 chain A
5u28 chain A
5u2c chain A
5u2c chain B
5u2e chain A
5u2e chain B
5u2f chain A
5u2f chain B
5ueo chain A
5ueo chain B
5uep chain A
5ueq chain A
5uer chain A
5ues chain A
5uet chain A
5ueu chain A
5ueu chain B
5uev chain A
5uex chain A
5uey chain A
5uez chain A
5uf0 chain A
5ula chain A
5ula chain B
5uoo chain A
5uvs chain A
5uvt chain A
5uvu chain A
5uvv chain A
5uvv chain B
5uvw chain A
5uvw chain B
5uvw chain C
5uvx chain A
5uvx chain B
5uvy chain A
5uvz chain A
5v67 chain A
5vbo chain A
5vbp chain A
5vbp chain B
5vom chain A
5vom chain B
5vzs chain A
5vzs chain B
5w55 chain A
5wa5 chain A
5wma chain A
5wmd chain A
5wmg chain A
5wuu chain A
5xhy chain A
5xi2 chain A
5xi3 chain A
5xi4 chain A
5y1y chain A
5y8c chain A
5y8w chain A
5y8y chain A
5y8z chain A
5y93 chain A
5y94 chain A
5you chain A
5yov chain A
5yqx chain A
5z1r chain A
5z1s chain A
5z1t chain A
5z5t chain A
5z5u chain A
5z5v chain A
5z8g chain A
5z8r chain A
5z8z chain A
5z90 chain A
5z9c chain A
5z9k chain A
6afr chain A
6ajv chain A
6ajw chain A
6ajx chain A
6ajy chain A
6ajz chain A
6bn7 chain C
6bn8 chain C
6bn9 chain C
6bnb chain C
6bnh chain A
6boy chain C
6c7q chain A
6c7r chain A
6cd4 chain A
6cd5 chain A
6cis chain A
6ciy chain A
6cj1 chain A
6cj2 chain A
6ckr chain A
6ckr chain B
6cks chain A
6czu chain A
6czv chain A
6djc chain A
6djc chain B
6dl2 chain A
6dmj chain A
6dml chain A
6dne chain A
6dne chain B
6duv chain A
6duv chain B
6e4a chain A
6e4a chain B
6ffd chain A
6fnx chain A
6fo5 chain A
6fsy chain A
6ft3 chain A
6ft4 chain A
6g0d chain A
6g0e chain A
6g0f chain A
6g0g chain A
6g0h chain A
6g0o chain A
6g0p chain A
6g0q chain A
6g0r chain A
6g0s chain A
6g0s chain B
6hdq chain A
6hov chain A
6i7x chain A
6i7y chain A
6in1 chain A
6ji3 chain A
6ji4 chain A
6ji5 chain A
6jj3 chain A
6jj5 chain A
6jj6 chain A
6jjb chain A
6kec chain A
6ked chain A
6kee chain A
6kef chain A
6keg chain A
6keh chain A
6kei chain A
6kej chain A
6kek chain A
6ko2 chain A
6lg4 chain A
6lg5 chain A
6lg6 chain A
6lg7 chain A
6lg8 chain A
6lg9 chain A
6lih chain A
6lim chain A
6mau chain A
6mh1 chain A
6mh1 chain B
6mh7 chain A
6mh7 chain B
6mnl chain B
6p05 chain A
6prt chain A
6ps9 chain A
6psb chain A
6q3y chain A
6q3y chain B
6q3z chain A
6q3z chain B
6rwj chain A
6s25 chain A
6s4b chain A
6s6k chain A
6sa2 chain A
6sa3 chain A
6sah chain A
6saj chain A
6sb8 chain A
6se4 chain A
6sis chain A
6sis chain E
6swn chain AAA
6swq chain AAA
6tpx chain AAA
6tpy chain AAA
6tpz chain AAA
6u0d chain A
6u6k chain A
6u6l chain A
6u72 chain A
6u72 chain B
6u74 chain A
6u74 chain B
6u74 chain C
6u74 chain D
6u8g chain A
6u8g chain B
6u8g chain C
6u8g chain D
6u8i chain A
6u8m chain A
6u8m chain B
6uls chain A
6ulv chain A
6ulv chain B
6ulv chain C
6ulv chain D
6uvj chain A
6uvm chain A
6uwu chain A
6uwx chain A
6v0u chain A
6v1k chain A
6v1l chain A
6v1u chain A
6viw chain A
6viw chain B
6viw chain C
6vix chain A
6vix chain B
6vix chain C
6vix chain D
6viz chain A
6viz chain B
6viz chain C
6vub chain A
6vuc chain A
6vuf chain A
6vuf chain B
6vuj chain A
6wgx chain A
6wgx chain B
6wvx chain A
6wvx chain B
6ww8 chain A
6x7b chain A
6x7b chain B
6x7c chain A
6x7d chain A
6x7d chain B
6xuz chain A
6xv3 chain A
6xv3 chain B
6xv3 chain C
6xv3 chain D
6xv7 chain A
6xvc chain B
6yin chain A
6yqn chain A
6yqo chain A
6yqp chain A
6yqz chain A
6z7g chain AAA
6z7l chain AAA
6z7m chain AAA
6zb3 chain AAA
6zci chain A
6zed chain AAA
6zel chain AAA
6zf9 chain AAA
7a9u chain AAA
7ajn chain A
7aqt chain A
7axr chain A
7b1t chain A
7c2z chain A
7c6p chain A
7dhs chain A
7dhs chain B
7ehw chain A
7ehy chain A
7eig chain A
7eik chain A
7eil chain A
7fh2 chain A
7fh2 chain B
7fh2 chain C
7fh2 chain D
7jkw chain A
7jkx chain A
7jky chain A
7jkz chain A
7k6g chain A
7k6g chain B
7k6h chain A
7khh chain D
7khl chain A
7khl chain B
7ko0 chain A
7l9m chain A
7l9m chain B
7la9 chain A
7la9 chain B
7la9 chain C
7la9 chain D
7la9 chain E
7la9 chain F
7lh8 chain A
7m16 chain A
7mce chain A
7mcf chain A
7mcf chain B
7mlq chain A
7mlr chain A
7mls chain A
7mr5 chain A
7mr5 chain B
7mr6 chain A
7mr6 chain B
7mr7 chain A
7mr7 chain B
7mr8 chain A
7mr9 chain A
7mra chain A
7mrb chain A
7o18 chain AAA
7oeo chain AAA
7p6v chain AAA
7p6w chain AAA
7p6y chain AAA
7p6y chain BBB
7q3f chain A
7r9c chain A
7rek chain A
7rek chain B
7rel chain A
7rem chain A
7rjo chain A
7rjp chain A
7rjq chain A
7rjr chain A
7rmd chain A
7rn2 chain A
7ruh chain A
7rui chain A
7rxr chain A
7rxr chain B
7rxs chain A
7rxt chain A
7tuq chain A
7tuq chain B
7tv0 chain A
7tv0 chain B
7tv0 chain C
7tv0 chain D
7uty chain A
7uzn chain A
7v1u chain A
7v2j chain A
7wjs chain A
7wjs chain B
7wjs chain C
7wky chain A
7wky chain B
7wky chain C
7wl4 chain A
7wl4 chain B
7wl4 chain C
7wl4 chain D
7wwz chain A
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
Tumor and normal comparison * P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.