Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1kex chain A
2qqi chain A
2qqm chain A
2qqn chain A
3i97 chain A
3i97 chain B
4deq chain A
4deq chain B
4rn5 chain A
5c7g chain A
5ijr chain A
5ijr chain B
5iyy chain A
5iyy chain B
5j1x chain A
5j1x chain B
5j1x chain C
5j1x chain D
5jgi chain A
5jgi chain B
5jgq chain A
5jgq chain B
5jhk chain A
5jhk chain B
5l73 chain A
5l73 chain B
6fmc chain A
6fmf chain A
6tkk chain A
7jjc chain A
7jjc chain B
7jjc chain C
7jjc chain D
7o1n chain A
7p5u chain AAA
7p5u chain BBB
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S894 GMSERNLS ALENYNF 10 989 58 - 73 54 15 12 63 - 79 45 108 99 110 101 5 - 83 34 46 4 Y899 NLSALENY NFELVDG 3 82 - - 33 15 - - - - 6 3 - - 13 12 - - - - - - T919 DKLNTQST YSEA___ 1 17 - - - - - - - - - - - - - - - - - - 12 5 Y920 KLNTQSTY SEA____ 2 26 - - 9 8 4 5 - - - - - - - - - - - - - - S921 LNTQSTYS EA_____ 9 212 17 - 20 11 9 9 54 - - - 15 14 4 4 26 8 11 6 4 -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S894 GMSERNLS ALENYNF 2.1e-4 - 7.4e-3 - - -0.74 -0.68 3.1e-6 - 0.093 - Y899 NLSALENY NFELVDG 1.2e-4 - 1.2e-4 - - - - - - - - T919 DKLNTQST YSEA___ - - - - - - - - - - - Y920 KLNTQSTY SEA____ - - - - - - - - - - - S921 LNTQSTYS EA_____ 0.06 - 0.06 - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S894
Y899
T919
Y920
S921
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S894 Y899 T919 Y920 S921 protein RNA SCNV methylation CCRCC S894 Y899 T919 Y920 S921 protein RNA SCNV methylation COAD S894 Y899 T919 Y920 S921 protein RNA SCNV methylation GBM S894 Y899 T919 Y920 S921 protein RNA SCNV methylation HNSCC S894 Y899 T919 Y920 S921 protein RNA SCNV methylation LSCC S894 Y899 T919 Y920 S921 protein RNA SCNV methylation LUAD S894 Y899 T919 Y920 S921 protein RNA SCNV methylation OV S894 Y899 T919 Y920 S921 protein RNA SCNV methylation PDAC S894 Y899 T919 Y920 S921 protein RNA SCNV methylation UCEC S894 Y899 T919 Y920 S921 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S894
Y899
T919
Y920
S921
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S894
Y899
T919
Y920
S921
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.