ITGB7: integrin subunit beta 7
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2brq chain C
2brq chain D
3v4p chain B
3v4p chain D
3v4v chain B
3v4v chain D
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S774 QLNWKQDS NPLYKSA 2 16 - - - - - - - - 5 4 - - - - - - 5 2 - - S795 PRFQEADS PTL____ 6 250 - - - - 44 63 - - 13 6 10 8 12 13 - - 15 4 55 7
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S774 QLNWKQDS NPLYKSA - - - - - - - - - - - S795 PRFQEADS PTL____ -0.22 - - -0.22 - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S774
S795
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S774 S795 protein RNA SCNV methylation CCRCC S774 S795 protein RNA SCNV methylation COAD S774 S795 protein RNA SCNV methylation GBM S774 S795 protein RNA SCNV methylation HNSCC S774 S795 protein RNA SCNV methylation LSCC S774 S795 protein RNA SCNV methylation LUAD S774 S795 protein RNA SCNV methylation OV S774 S795 protein RNA SCNV methylation PDAC S774 S795 protein RNA SCNV methylation UCEC S774 S795 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S774
S795
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S774
S795
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.