CLTC: clathrin heavy chain
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2xzg chain A
4g55 chain A
6e4l chain A
6qnn chain A
6qnp chain A
6qnp chain B
6qnp chain C
6qnp chain D
7bn1 chain A
7bn1 chain B
7bn2 chain AAA
7bn2 chain BBB
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S67 NPIRRPIS ADSAIMN 7 478 - - - - 39 33 99 - 18 10 60 55 - - 21 4 58 23 55 3 T103 KSKMKAHT MTDDVTF 1 36 - - - - - - 36 - - - - - - - - - - - - - T105 KMKAHTMT DDVTFWK 8 769 - - 99 76 4 5 62 - 40 25 93 86 101 92 - - 47 21 7 11 S146 VKMFDRHS SLAGCQI 1 27 - - - - - - 27 - - - - - - - - - - - - - T235 LHIIEVGT PPTGNQP 7 332 - - 38 33 6 3 89 - 51 29 24 23 8 7 - - 15 6 - - S378 LFAQGNYS EAAKVAA 1 27 - - - - - - 27 - - - - - - - - - - - - - T394 APKGILRT PDTIRRF 9 1431 - - 103 80 97 100 99 - 108 62 108 99 110 101 83 19 105 44 95 18 S403 DTIRRFQS VPAQPGQ 5 131 - - 23 21 - - 28 - 27 18 - - 5 4 - - 4 1 - - T411 VPAQPGQT SPLLQYF 3 29 - - 5 4 - - 10 - 7 3 - - - - - - - - - - S412 PAQPGQTS PLLQYFG 6 137 - - 9 8 - - 35 - 17 8 - - - - 7 1 19 6 25 2
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S67 NPIRRPIS ADSAIMN -0.36 - - -0.12 - - 7.6e-4 - - -7.0e-4 - T103 KSKMKAHT MTDDVTF - - - - - - - - - - - T105 KMKAHTMT DDVTFWK -2.3e-35 - -4.8e-6 - - -0.16 -5e-26 -8.2e-28 - -0.76 - S146 VKMFDRHS SLAGCQI - - - - - - - - - - - T235 LHIIEVGT PPTGNQP -1.6e-5 - -5.7e-9 - - -7.1e-3 0.3 - - - - S378 LFAQGNYS EAAKVAA - - - - - - - - - - - T394 APKGILRT PDTIRRF 2e-23 - -0.9 2.0e-5 - 3.6e-3 0.077 9.2e-17 0.86 4e-12 7.3e-5 S403 DTIRRFQS VPAQPGQ -0.13 - -0.41 - - -0.19 - - - - - T411 VPAQPGQT SPLLQYF - - - - - - - - - - - S412 PAQPGQTS PLLQYFG - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S67
T103
T105
S146
T235
S378
T394
S403
T411
S412
Y417
Y430
S576
Y634
S825
S886
Y899
S938
S944
Y946
S1167
Y1206
S1222
S1229
T1230
S1249
S1427
Y1438
S1440
S1462
S1466
T1473
Y1477
S1494
Y1513
S1524
S1616
S1618
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation CCRCC S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation COAD S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation GBM S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation HNSCC S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation LSCC S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation LUAD S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation OV S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation PDAC S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation UCEC S67 T103 T105 S146 T235 S378 T394 S403 T411 S412 Y417 Y430 S576 Y634 S825 S886 Y899 S938 S944 Y946 S1167 Y1206 S1222 S1229 T1230 S1249 S1427 Y1438 S1440 S1462 S1466 T1473 Y1477 S1494 Y1513 S1524 S1616 S1618 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S67
T103
T105
S146
T235
S378
T394
S403
T411
S412
Y417
Y430
S576
Y634
S825
S886
Y899
S938
S944
Y946
S1167
Y1206
S1222
S1229
T1230
S1249
S1427
Y1438
S1440
S1462
S1466
T1473
Y1477
S1494
Y1513
S1524
S1616
S1618
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
Loading, please wait
all sites
S67
T103
T105
S146
T235
S378
T394
S403
T411
S412
Y417
Y430
S576
Y634
S825
S886
Y899
S938
S944
Y946
S1167
Y1206
S1222
S1229
T1230
S1249
S1427
Y1438
S1440
S1462
S1466
T1473
Y1477
S1494
Y1513
S1524
S1616
S1618
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.