Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2n19 chain A
3cok chain A
3cok chain B
4jxf chain A
4n7v chain A
4n7v chain B
4n7z chain A
4n9j chain A
4n9j chain B
4yur chain A
4yyp chain A
5lhy chain 1
5lhy chain 2
5lhy chain 3
5lhy chain 4
5lhy chain 5
5lhy chain 6
5lhy chain 7
5lhy chain 8
5lhy chain 9
5lhy chain A
5lhy chain B
5lhy chain C
5lhy chain D
5lhy chain E
5lhy chain F
5lhy chain G
5lhy chain H
5lhy chain I
5lhy chain J
5lhy chain K
5lhy chain L
5lhy chain M
5lhy chain N
5lhy chain O
5lhy chain P
5lhy chain Q
5lhy chain R
5lhy chain S
5lhy chain T
5lhy chain U
5lhy chain V
5lhy chain W
5lhy chain X
5lhy chain Y
5lhy chain Z
5lhy chain a
5lhy chain b
5lhy chain c
5lhy chain d
5lhy chain e
5lhy chain f
5lhy chain g
5lhy chain h
5lhy chain i
5lhy chain j
5lhy chain k
5lhy chain l
5lhy chain m
5lhy chain n
5lhy chain o
5lhy chain p
5lhy chain q
5lhy chain r
5lhy chain s
5lhy chain t
5lhy chain u
5lhy chain v
5lhy chain w
5lhy chain x
5lhy chain y
5lhz chain A
5lhz chain B
5lhz chain C
6n45 chain A
6n45 chain B
6n46 chain A
6n46 chain B
6n46 chain C
6n46 chain D
6n46 chain E
6n46 chain F
6n46 chain G
6n46 chain H
6w38 chain B
6w3i chain B
6w3j chain B
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S378 RYLRRAYS SDRSGTS 1 8 8 - - - - - - - - - - - - - - - - - - - S382 RAYSSDRS GTSNSQS 1 9 - - - - - - - - - - 5 4 - - - - - - - - S401 YTMERCHS AEMLSVS 5 95 9 - - - - - - - 40 21 5 4 - - - - 5 2 - 9 S421 GENEERYS PTDNNAN 3 38 - - - - - - - - - - - - - - 7 1 4 1 12 13 T423 NEERYSPT DNNANIF 3 138 - - - - - - - - 17 10 45 40 14 12 - - - - - - S497 RKTTEYDS ISPNRDF 1 8 - - - - - - - - - - - - - - - - - - 5 3 S592 RTLRSITS PLVAHRL 1 25 - - - - - - - - - - - - - - 21 4 - - - - S665 PLADRPPS PTDNISR 10 359 24 - 23 21 3 6 18 - 29 18 15 14 30 28 41 10 9 4 48 18 S817 TSSPKALS PPPSVDS 2 30 14 - - - - - - - - - - - - - - - - - 11 5
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S378 RYLRRAYS SDRSGTS - - - - - - - - - - - S382 RAYSSDRS GTSNSQS - - - - - - - - - - - S401 YTMERCHS AEMLSVS -4.2e-6 - - - - -4.2e-6 - - - - - S421 GENEERYS PTDNNAN - - - - - - - - - - - T423 NEERYSPT DNNANIF 2e-15 - - - - - 2e-15 - - - - S497 RKTTEYDS ISPNRDF - - - - - - - - - - - S592 RTLRSITS PLVAHRL - - - - - - - - - - - S665 PLADRPPS PTDNISR 1.2e-3 - 0.13 - - 1.8e-4 - 0.18 -0.02 - 0.003 S817 TSSPKALS PPPSVDS - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S378
S382
S401
S421
T423
S497
S592
S665
S817
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation CCRCC S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation COAD S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation GBM S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation HNSCC S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation LSCC S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation LUAD S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation OV S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation PDAC S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation UCEC S378 S382 S401 S421 T423 S497 S592 S665 S817 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S378
S382
S401
S421
T423
S497
S592
S665
S817
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S378
S382
S401
S421
T423
S497
S592
S665
S817
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.