SNRPG: small nuclear ribonucleoprotein polypeptide G
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
3cw1 chain 3
3cw1 chain 4
3cw1 chain 5
3cw1 chain G
3jcr chain U
3jcr chain u
3pgw chain G
3pgw chain J
4pjo chain G
4pjo chain U
4pjo chain g
4pjo chain u
4v98 chain A4
4v98 chain AH
4v98 chain AP
4v98 chain AX
4v98 chain Af
4v98 chain An
4v98 chain Av
4v98 chain B4
4v98 chain BH
4v98 chain BP
4v98 chain BX
4v98 chain Bf
4v98 chain Bn
4v98 chain Bv
4v98 chain CH
4v98 chain CP
4v98 chain CX
4v98 chain Cf
4v98 chain Cn
4v98 chain Cv
4wzj chain G
4wzj chain GG
4wzj chain GGG
4wzj chain GGGG
4wzj chain N
4wzj chain NN
4wzj chain NNN
4wzj chain NNNN
4wzj chain U
4wzj chain UU
4wzj chain UUU
4wzj chain UUUU
5mqf chain d
5mqf chain k
5o9z chain V
5o9z chain d
5o9z chain k
5xjc chain g
5xjc chain n
5xjl chain G
5xjq chain G
5xjr chain G
5xjt chain G
5xju chain G
5yzg chain g
5yzg chain n
5z56 chain g
5z56 chain n
5z57 chain g
5z57 chain n
5z58 chain g
5z58 chain n
6ah0 chain S
6ah0 chain d
6ah0 chain n
6ahd chain S
6ahd chain f
6ahd chain n
6ff7 chain d
6ff7 chain k
6icz chain g
6icz chain n
6id0 chain g
6id0 chain n
6id1 chain g
6id1 chain n
6qdv chain g
6qdv chain r
6qw6 chain 4g
6qw6 chain 5g
6qx9 chain 1g
6qx9 chain 2g
6qx9 chain 4g
6qx9 chain 5g
6v4x chain G
6y53 chain k
6y5q chain k
7a5p chain g
7a5p chain k
7abg chain d
7abg chain k
7abi chain d
7abi chain k
7b0y chain h
7dvq chain g
7dvq chain n
7evo chain d
7w59 chain g
7w59 chain n
7w5a chain g
7w5a chain n
7w5b chain g
7w5b chain n
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S66 MVVIRGNS IIMLEAL 9 546 56 - 42 30 4 5 55 - 22 15 74 67 70 64 15 1 - - 17 9
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S66 MVVIRGNS IIMLEAL 8.4e-3 - 0.058 - - 0.59 0.026 0.54 - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S66
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S66 protein RNA SCNV methylation CCRCC S66 protein RNA SCNV methylation COAD S66 protein RNA SCNV methylation GBM S66 protein RNA SCNV methylation HNSCC S66 protein RNA SCNV methylation LSCC S66 protein RNA SCNV methylation LUAD S66 protein RNA SCNV methylation OV S66 protein RNA SCNV methylation PDAC S66 protein RNA SCNV methylation UCEC S66 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S66
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S66
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.