- DENR:
- density regulated re-initiation and release factor
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S20 | CKGDPRNSAKLDADY | 3 | 55 | 38 | - | - | - | - | - | - | - | - | - | 5 | 4 | - | - | 5 | 3 | - | - | - | - |
S73 | AKLTVENSPKQEAGI | 10 | 1542 | 122 | - | 103 | 80 | 97 | 100 | 99 | - | 108 | 62 | 108 | 98 | 106 | 96 | 83 | 19 | 104 | 44 | 95 | 18 |
S81 | PKQEAGISEGQGTAG | 4 | 134 | 58 | - | 4 | 4 | - | - | - | - | - | - | 14 | 13 | 22 | 19 | - | - | - | - | - | - |
T86 | GISEGQGTAGEEEEK | 10 | 749 | 40 | - | 66 | 45 | 32 | 30 | 27 | - | 96 | 55 | 69 | 62 | 42 | 38 | 7 | 2 | 90 | 38 | 10 | - |
S189 | WPEVDDDSIEDLGEV | 7 | 395 | - | - | 27 | 19 | - | - | 81 | - | 27 | 18 | 40 | 36 | 36 | 32 | - | - | 41 | 17 | 19 | 2 |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S20 | CKGDPRNSAKLDADY | - | - | - | - | - | - | - | - | - | - | - |
S73 | AKLTVENSPKQEAGI | 2.3e-60 | - | 2.5e-17 | 2.3e-13 | - | 3.6e-5 | 2.8e-33 | 1.1e-33 | 7.1e-3 | -0.055 | 0.13 |
S81 | PKQEAGISEGQGTAG | 3.0e-5 | - | - | - | - | - | - | 3.0e-5 | - | - | - |
T86 | GISEGQGTAGEEEEK | -0.06 | - | 3.2e-12 | -0.42 | - | 0.87 | -3.2e-5 | -0.12 | - | -1.6e-7 | - |
S189 | WPEVDDDSIEDLGEV | -0.007 | - | -0.86 | - | - | -0.065 | -0.033 | -0.048 | - | 0.92 | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |