Protein: ENSP00000285968
Gene: NUP205

LinkedOmicsKB © 2022-2023 Zhang Lab

NUP205:
nucleoporin 205

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
Y1152DDMPVKPYSDGEGGI18--44----------------
S1153DMPVKPYSDGEGGIE323--44--9---------51--
S1165GIEDENRSVSGFLHF988844---878481-955589817768831952153
S1167EDENRSVSGFLHFDT1088074-222071145-10159108999888471033133213
T1225HKNLRGQTVCNVKLL17----------------52--
S1939KSRRLQDSFASETNL1057696-542799-1510787243394011513613
S1942RLQDSFASETNLDFR10884103-82605481-22148881756862151788316
T1944QDSFASETNLDFRSG18------------44------
Showing 1 to 8 of 8 rows

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Y1152DDMPVKPYSDGEGGI-----------
S1153DMPVKPYSDGEGGIE-----------
S1165GIEDENRSVSGFLHF1.7e-3--3.7e-4--0.270.031-0.370.001--
S1167EDENRSVSGFLHFDT3.5e-39--0.017--2.8e-101.6e-322.9e-180.061.0e-51.3e-4
T1225HKNLRGQTVCNVKLL-----------
S1939KSRRLQDSFASETNL-2e-15------3.2e-12-2.3e-6-0.076--0.016
S1942RLQDSFASETNLDFR2.7e-6--3.2e-5--0.0383.7e-162.7e-3-0.92-0.012
T1944QDSFASETNLDFRSG-----------
Showing 1 to 8 of 8 rows

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylationCCRCCY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylationCOADY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylationGBMY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylationHNSCCY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylationLSCCY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylationLUADY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylationOVY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylationPDACY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylationUCECY1152S1153S1165S1167T1225S1939S1942T1944proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.