Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1p5z chain B
1p60 chain A
1p60 chain B
1p61 chain B
1p62 chain B
2a2z chain A
2a2z chain B
2a2z chain C
2a2z chain D
2a30 chain A
2a30 chain B
2a30 chain C
2a30 chain D
2a7q chain A
2no0 chain A
2no0 chain B
2no1 chain A
2no1 chain B
2no6 chain A
2no6 chain B
2no7 chain A
2no7 chain B
2no9 chain A
2no9 chain B
2noa chain A
2noa chain B
2qrn chain A
2qrn chain B
2qrn chain C
2qrn chain D
2qro chain A
2qro chain B
2qro chain C
2qro chain D
2zi3 chain A
2zi3 chain B
2zi4 chain A
2zi5 chain A
2zi5 chain B
2zi5 chain C
2zi5 chain D
2zi6 chain A
2zi6 chain B
2zi6 chain C
2zi6 chain D
2zi7 chain A
2zi7 chain B
2zi9 chain A
2zi9 chain B
2zia chain A
2zia chain B
3hp1 chain A
3ipx chain A
3ipy chain A
3ipy chain B
3kfx chain A
3kfx chain B
3mjr chain A
3mjr chain B
3mjr chain C
3mjr chain D
3qej chain A
3qej chain B
3qen chain A
3qen chain B
3qeo chain A
3qeo chain B
4jlj chain A
4jlj chain B
4jlk chain A
4jlk chain B
4jlm chain A
4jlm chain B
4jln chain A
4jln chain B
4kcg chain A
4kcg chain B
4l5b chain A
4l5b chain B
4q18 chain A
4q18 chain B
4q19 chain A
4q19 chain B
4q1a chain A
4q1a chain B
4q1b chain A
4q1b chain B
4q1c chain A
4q1c chain B
4q1d chain A
4q1d chain B
4q1e chain A
4q1e chain B
4q1f chain A
4q1f chain B
5mqj chain A
5mqj chain B
5mqj chain C
5mqj chain D
5mql chain A
5mql chain B
5mql chain C
5mql chain D
5mqt chain A
5mqt chain B
5mqt chain C
5mqt chain D
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S8 MATPPKRS CPSFSAS 1 8 - - - - - - - - - - - - - - - - - - 8 - S11 PPKRSCPS FSASSEG 9 824 48 - - - 92 96 99 - 72 36 29 26 22 21 56 12 91 37 78 9 S13 KRSCPSFS ASSEGTR 1 9 - - - - 4 5 - - - - - - - - - - - - - - S15 SCPSFSAS SEGTRIK 9 368 54 - - - 55 52 44 - 22 14 24 22 5 4 47 11 3 2 7 2 S16 CPSFSASS EGTRIKK 4 101 47 - - - - - - - 12 6 14 14 - - 7 1 - - - - T64 RWCNVQST QDEFEEL 2 25 8 - 13 4 - - - - - - - - - - - - - - - - T72 QDEFEELT MSQKNGG 9 338 47 - 20 18 5 4 - - 50 30 29 26 43 40 5 3 9 3 6 - S74 EFEELTMS QKNGGNV 10 1101 37 - 21 12 92 96 99 - 73 45 83 78 54 48 83 18 105 44 95 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S8 MATPPKRS CPSFSAS - - - - - - - - - - - S11 PPKRSCPS FSASSEG 3.8e-5 - - 8.7e-6 - 8.2e-5 -0.28 0.89 -0.88 4.9e-3 - S13 KRSCPSFS ASSEGTR - - - - - - - - - - - S15 SCPSFSAS SEGTRIK 1.1e-9 - - 8.1e-11 - 0.011 4.5e-4 - -0.7 - - S16 CPSFSASS EGTRIKK - - - - - - - - - - - T64 RWCNVQST QDEFEEL - - - - - - - - - - - T72 QDEFEELT MSQKNGG 8.6e-18 - 1.3e-3 - - 5e-9 2.7e-5 8.7e-5 - - - S74 EFEELTMS QKNGGNV 5.1e-25 - 5.5e-7 1e-13 - 1.2e-8 4.2e-8 0.47 0.14 3.5e-4 -0.86
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S8
S11
S13
S15
S16
T64
T72
S74
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation CCRCC S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation COAD S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation GBM S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation HNSCC S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation LSCC S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation LUAD S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation OV S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation PDAC S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation UCEC S8 S11 S13 S15 S16 T64 T72 S74 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S8
S11
S13
S15
S16
T64
T72
S74
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S8
S11
S13
S15
S16
T64
T72
S74
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.