TAF10: TATA-box binding protein associated factor 10
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
2f69 chain B
3m53 chain B
3m54 chain B
3m55 chain B
3m56 chain B
3m57 chain B
3m58 chain B
3m59 chain B
3m5a chain B
4j7f chain B
4j7i chain B
4j83 chain B
4j8o chain B
4wv4 chain A
5eg2 chain B
6mzc chain O
6mzd chain N
6mzl chain N
6mzl chain O
6mzm chain O
7edx chain J
7edx chain j
7eg7 chain J
7eg7 chain j
7eg8 chain J
7eg8 chain j
7eg9 chain J
7eg9 chain j
7ega chain J
7ega chain j
7egb chain J
7egb chain j
7egc chain J
7egc chain j
7egd chain J
7egd chain j
7ege chain J
7ege chain j
7egf chain j
7egg chain J
7egi chain J
7egi chain j
7egj chain J
7egj chain j
7ena chain DJ
7ena chain Dj
7enc chain DJ
7enc chain Dj
7ktr chain H
7kts chain H
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S44 TAAENKAS PAGTAGG 9 990 78 - 80 63 - - 79 - 102 58 93 81 55 53 42 9 60 24 95 18
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S44 TAAENKAS PAGTAGG -0.8 - -4.1e-5 - - 3.8e-4 0.61 -0.94 - 0.32 -0.14
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S44
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S44 protein RNA SCNV methylation CCRCC S44 protein RNA SCNV methylation COAD S44 protein RNA SCNV methylation GBM S44 protein RNA SCNV methylation HNSCC S44 protein RNA SCNV methylation LSCC S44 protein RNA SCNV methylation LUAD S44 protein RNA SCNV methylation OV S44 protein RNA SCNV methylation PDAC S44 protein RNA SCNV methylation UCEC S44 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S44
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S44
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.