MED1: mediator complex subunit 1
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
1rjk chain C
1rk3 chain C
1rkg chain C
1rkh chain C
2o4j chain C
2o4r chain C
2zfx chain C
3a2h chain B
3aun chain B
3vjs chain C
3vjt chain C
3vrt chain C
3vru chain C
3vrv chain C
3vrw chain C
3w0g chain C
3w0h chain C
3w0i chain C
3w0j chain C
3w5p chain C
3w5q chain C
3w5r chain C
3w5t chain C
3wt5 chain C
3wt6 chain C
3wt7 chain C
3wtq chain C
4ynk chain C
5awj chain C
5awk chain C
5b41 chain C
5b5b chain C
5b5b chain F
5gic chain C
5gid chain C
5gie chain C
5gie chain E
5xpm chain C
5xpn chain C
5xpo chain C
5xpp chain C
5xuq chain C
5xzf chain C
5xzh chain C
5zwe chain C
5zwf chain C
5zwh chain C
5zwi chain C
6d94 chain B
6jez chain C
6k5o chain C
6onj chain C
7c7v chain C
7c7w chain C
7emf chain A
7ena chain a
7enc chain a
7enj chain A
7oxu chain B
7vqp chain C
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S238 LLDDKTAS PIILHEN 3 48 7 - - - - - - - - - - - - - 29 5 5 2 - - T522 AETIQADT PALSLIA 1 8 - - 4 4 - - - - - - - - - - - - - - - - Y548 PPASSPGY GMTTGNN 4 41 7 - 4 4 - - - - 11 5 5 5 - - - - - - - - T566 GTTTPTNT FPGGPIT 1 9 - - - - - - - - 5 4 - - - - - - - - - - S588 SIKDRHES VGHGEDF 10 1035 83 - 82 61 83 87 37 - 80 44 78 71 83 77 19 5 79 32 32 2 S616 QITGNGGS TIGSSPT 3 45 - - 12 12 - - - - 4 4 - - - - - - 9 4 - - T617 ITGNGGST IGSSPTP 1 8 - - - - - - - - - - - - 4 4 - - - - - - T623 STIGSSPT PPHHTPP 3 24 8 - - - - - - - 4 3 - - 5 4 - - - - - - T628 SPTPPHHT PPPVSSM 9 437 23 - 14 12 8 10 8 - 52 28 43 40 50 43 - - 59 23 12 12 Y661 AQDFSTLY GSSPLER 1 8 - - - - - - - - - - - - 4 4 - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S238 LLDDKTAS PIILHEN - - - - - - - - - - - T522 AETIQADT PALSLIA - - - - - - - - - - - Y548 PPASSPGY GMTTGNN - - - - - - - - - - - T566 GTTTPTNT FPGGPIT - - - - - - - - - - - S588 SIKDRHES VGHGEDF 3.3e-7 - 1 0.15 - 1.5e-3 -0.71 6.7e-9 - 0.014 - S616 QITGNGGS TIGSSPT - - - - - - - - - - - T617 ITGNGGST IGSSPTP - - - - - - - - - - - T623 STIGSSPT PPHHTPP - - - - - - - - - - - T628 SPTPPHHT PPPVSSM -0.89 - - - - -2.1e-3 0.11 0.18 - -0.89 - Y661 AQDFSTLY GSSPLER - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S238
T522
Y548
T566
S588
S616
T617
T623
T628
Y661
S663
S664
S675
S770
S771
S772
S774
T780
S784
S795
T805
S900
S953
T998
S1000
S1021
S1026
S1027
T1032
S1040
S1042
T1051
T1057
S1130
Y1132
S1134
S1137
S1155
S1156
S1167
S1169
S1185
S1187
S1192
S1207
T1215
S1218
S1219
S1223
S1246
S1251
S1252
S1254
S1302
S1347
S1366
T1367
S1368
S1371
S1401
S1433
S1437
S1439
T1440
S1447
S1453
Y1456
S1463
S1465
S1467
S1470
S1475
S1479
S1481
S1482
S1536
S1561
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation CCRCC S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation COAD S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation GBM S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation HNSCC S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation LSCC S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation LUAD S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation OV S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation PDAC S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation UCEC S238 T522 Y548 T566 S588 S616 T617 T623 T628 Y661 S663 S664 S675 S770 S771 S772 S774 T780 S784 S795 T805 S900 S953 T998 S1000 S1021 S1026 S1027 T1032 S1040 S1042 T1051 T1057 S1130 Y1132 S1134 S1137 S1155 S1156 S1167 S1169 S1185 S1187 S1192 S1207 T1215 S1218 S1219 S1223 S1246 S1251 S1252 S1254 S1302 S1347 S1366 T1367 S1368 S1371 S1401 S1433 S1437 S1439 T1440 S1447 S1453 Y1456 S1463 S1465 S1467 S1470 S1475 S1479 S1481 S1482 S1536 S1561 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S238
T522
Y548
T566
S588
S616
T617
T623
T628
Y661
S663
S664
S675
S770
S771
S772
S774
T780
S784
S795
T805
S900
S953
T998
S1000
S1021
S1026
S1027
T1032
S1040
S1042
T1051
T1057
S1130
Y1132
S1134
S1137
S1155
S1156
S1167
S1169
S1185
S1187
S1192
S1207
T1215
S1218
S1219
S1223
S1246
S1251
S1252
S1254
S1302
S1347
S1366
T1367
S1368
S1371
S1401
S1433
S1437
S1439
T1440
S1447
S1453
Y1456
S1463
S1465
S1467
S1470
S1475
S1479
S1481
S1482
S1536
S1561
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
Loading, please wait
all sites
S238
T522
Y548
T566
S588
S616
T617
T623
T628
Y661
S663
S664
S675
S770
S771
S772
S774
T780
S784
S795
T805
S900
S953
T998
S1000
S1021
S1026
S1027
T1032
S1040
S1042
T1051
T1057
S1130
Y1132
S1134
S1137
S1155
S1156
S1167
S1169
S1185
S1187
S1192
S1207
T1215
S1218
S1219
S1223
S1246
S1251
S1252
S1254
S1302
S1347
S1366
T1367
S1368
S1371
S1401
S1433
S1437
S1439
T1440
S1447
S1453
Y1456
S1463
S1465
S1467
S1470
S1475
S1479
S1481
S1482
S1536
S1561
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.