RPS9: ribosomal protein S9
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4ug0 chain SJ
4v6x chain AJ
5a2q chain J
5aj0 chain BJ
5flx chain J
5lks chain SJ
5oa3 chain J
5t2c chain AL
5vyc chain J1
5vyc chain J2
5vyc chain J3
5vyc chain J4
5vyc chain J5
5vyc chain J6
6fec chain K
6g18 chain J
6g4s chain J
6g4w chain J
6g51 chain J
6g53 chain J
6g5h chain J
6g5i chain J
6ip5 chain 3I
6ip6 chain 3I
6ip8 chain 3I
6ole chain SJ
6olf chain SJ
6olg chain BJ
6oli chain SJ
6olz chain BJ
6om0 chain SJ
6om7 chain SJ
6qzp chain SJ
6xa1 chain SJ
6y0g chain SJ
6y2l chain SJ
6y57 chain SJ
6ybw chain D
6z6l chain SJ
6z6m chain SJ
6z6n chain SJ
6zlw chain J
6zm7 chain SJ
6zme chain SJ
6zmi chain SJ
6zmo chain SJ
6zmt chain J
6zmw chain D
6zn5 chain J
6zoj chain J
6zok chain J
6zon chain c
6zp4 chain c
6zuo chain J
6zv6 chain J
6zvh chain J
6zvj chain c
6zxd chain J
6zxe chain J
6zxf chain J
6zxg chain J
6zxh chain J
7a09 chain c
7k5i chain J
7mq8 chain L9
7mq9 chain L9
7mqa chain L9
7qp6 chain D
7qp7 chain D
7tql chain J
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S23 PRRPFEKS RLDQELK 1 32 - - 20 12 - - - - - - - - - - - - - - - - Y96 EGKMKLDY ILGLKIE 1 19 - - - - - - - - 12 7 - - - - - - - - - - S153 SFIVRLDS QKHIDFS 1 7 7 - - - - - - - - - - - - - - - - - - - S163 HIDFSLRS PYGGGRP 7 228 30 - - - 12 14 - - 51 31 15 13 4 4 14 2 - - 34 4
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S23 PRRPFEKS RLDQELK -1.7e-6 - -1.7e-6 - - - - - - - - Y96 EGKMKLDY ILGLKIE - - - - - - - - - - - S153 SFIVRLDS QKHIDFS - - - - - - - - - - - S163 HIDFSLRS PYGGGRP 0.23 - - - - 0.23 - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S23
Y96
S153
S163
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S23 Y96 S153 S163 protein RNA SCNV methylation CCRCC S23 Y96 S153 S163 protein RNA SCNV methylation COAD S23 Y96 S153 S163 protein RNA SCNV methylation GBM S23 Y96 S153 S163 protein RNA SCNV methylation HNSCC S23 Y96 S153 S163 protein RNA SCNV methylation LSCC S23 Y96 S153 S163 protein RNA SCNV methylation LUAD S23 Y96 S153 S163 protein RNA SCNV methylation OV S23 Y96 S153 S163 protein RNA SCNV methylation PDAC S23 Y96 S153 S163 protein RNA SCNV methylation UCEC S23 Y96 S153 S163 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S23
Y96
S153
S163
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S23
Y96
S153
S163
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.