CDC40: cell division cycle 40
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
5mqf chain E
5xjc chain W
5yzg chain W
5z56 chain W
5z57 chain W
6ff4 chain E
6ff7 chain E
6icz chain W
6id0 chain W
6id1 chain W
6qdv chain o
6zym chain E
7a5p chain E
7aav chain 8
7abi chain 8
7w59 chain W
7w5a chain W
7w5b chain W
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S43 SLMHLTKS PSSKPSL 9 706 95 - 19 16 79 65 9 - - - 78 73 87 80 57 12 14 6 5 11
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S43 SLMHLTKS PSSKPSL 1.2e-3 - - 3.0e-4 - - 0.41 -0.34 2.9e-3 - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S43
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S43 protein RNA SCNV methylation CCRCC S43 protein RNA SCNV methylation COAD S43 protein RNA SCNV methylation GBM S43 protein RNA SCNV methylation HNSCC S43 protein RNA SCNV methylation LSCC S43 protein RNA SCNV methylation LUAD S43 protein RNA SCNV methylation OV S43 protein RNA SCNV methylation PDAC S43 protein RNA SCNV methylation UCEC S43 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S43
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S43
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.