- SCAMP3:
- secretory carrier membrane protein 3
Lollipop plot
Phosphosites location and occurrence
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S15 | GNPFAEPSELDNPFQ | 4 | 65 | 14 | - | - | - | 5 | 4 | - | - | - | - | 20 | 16 | - | - | - | - | 4 | 2 | - | - |
S32 | AVIQHRPSRQYATLD | 10 | 1273 | 87 | - | 99 | 76 | 73 | 69 | 90 | - | 108 | 62 | 89 | 71 | 70 | 63 | 63 | 12 | 97 | 39 | 87 | 18 |
Y35 | QHRPSRQYATLDVYN | 3 | 25 | - | - | 4 | 4 | - | - | 8 | - | - | - | - | - | - | - | - | - | - | - | 7 | 2 |
S72 | SAPSLQPSRKLSPTE | 3 | 200 | - | - | 41 | 31 | - | - | - | - | 13 | 5 | - | - | 57 | 53 | - | - | - | - | - | - |
S76 | LQPSRKLSPTEPKNY | 10 | 1024 | 61 | - | 41 | 23 | 93 | 95 | 99 | - | 63 | 38 | 49 | 46 | 55 | 47 | 76 | 17 | 76 | 32 | 95 | 18 |
T78 | PSRKLSPTEPKNYGS | 1 | 15 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 11 | 4 | - | - |
S85 | TEPKNYGSYSTQASA | 8 | 289 | 32 | - | 9 | 8 | 36 | 36 | 46 | - | 6 | 3 | 9 | 8 | - | - | - | - | 24 | 10 | 44 | 18 |
Y86 | EPKNYGSYSTQASAA | 8 | 94 | 17 | - | 4 | 4 | 8 | 10 | - | - | 6 | 3 | - | - | 5 | 4 | 5 | 3 | 9 | 4 | 12 | - |
S87 | PKNYGSYSTQASAAA | 1 | 8 | - | - | - | - | - | - | - | - | - | - | - | - | 4 | 4 | - | - | - | - | - | - |
T88 | KNYGSYSTQASAAAA | 6 | 179 | 6 | - | 18 | 8 | - | - | - | - | 6 | 4 | 45 | 41 | 23 | 20 | 7 | 1 | - | - | - | - |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S15 | GNPFAEPSELDNPFQ | -0.16 | - | - | - | - | - | -0.16 | - | - | - | - |
S32 | AVIQHRPSRQYATLD | 0.14 | - | 7.8e-25 | -9.7e-7 | - | 0.39 | 0.057 | 0.017 | 0.66 | -0.015 | -1.5e-5 |
Y35 | QHRPSRQYATLDVYN | - | - | - | - | - | - | - | - | - | - | - |
S72 | SAPSLQPSRKLSPTE | 0.024 | - | 0.55 | - | - | - | - | 9.3e-3 | - | - | - |
S76 | LQPSRKLSPTEPKNY | 3.8e-19 | - | 0.11 | 8.2e-22 | - | 0.18 | 4.2e-5 | 8.1e-8 | 0.06 | -9.4e-5 | 9.3e-8 |
T78 | PSRKLSPTEPKNYGS | - | - | - | - | - | - | - | - | - | - | - |
S85 | TEPKNYGSYSTQASA | 2.8e-3 | - | - | 0.012 | - | - | - | - | - | 0.05 | 0.47 |
Y86 | EPKNYGSYSTQASAA | - | - | - | - | - | - | - | - | - | - | - |
S87 | PKNYGSYSTQASAAA | - | - | - | - | - | - | - | - | - | - | - |
T88 | KNYGSYSTQASAAAA | 2.4e-4 | - | - | - | - | - | 0.31 | 2.8e-5 | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |