Protein: ENSP00000307666

VPS50:: VPS50 subunit of EARP/GARPII complex

Lollipop plot

Phosphosites location and occurrence

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* Hover over the dots to see sequence motif and cohorts.

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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				BRCA		CCRCC		COAD		GBM		HNSCC		LSCC		LUAD		OV		PDAC		UCEC
Site	Sequence	Cohorts	Total	T	N	T	N	T	N	T	N	T	N	T	N	T	N	T	N	T	N	T	N
S15	MTRQGLKSPQESLSD	7	1106	-	-	103	80	-	-	99	-	108	62	108	99	96	89	-	-	105	44	95	18
S19	GLKSPQESLSDLGAI	7	418	-	-	33	23	-	-	36	-	17	10	79	70	44	41	-	-	24	10	31	-
S492	EFKFMEQSRSPSVSP	5	82	17	-	17	16	-	-	-	-	5	4	5	4	-	-	-	-	10	4	-	-
S494	KFMEQSRSPSVSPSK	10	1509	122	-	99	76	80	81	99	-	108	62	108	99	110	101	83	19	105	44	95	18
S496	MEQSRSPSVSPSKQP	10	487	58	-	4	4	4	5	62	-	102	59	34	29	26	23	7	2	41	15	12	-
S498	QSRSPSVSPSKQPVS	8	305	26	-	-	-	24	21	54	-	6	3	5	4	40	35	15	3	-	-	63	6
S519	TLFEQYCSGGNPFEI	5	201	44	-	38	35	-	-	27	-	-	-	25	23	5	4	-	-	-	-	-	-
T535	ANHKDEETEDVLASN	6	402	99	-	78	56	-	-	27	-	48	29	20	19	13	13	-	-	-	-	-	-
S541	ETEDVLASNGYESDE	5	79	-	-	9	8	-	-	17	-	6	4	10	8	-	-	-	-	12	5	-	-
Y544	DVLASNGYESDEQEK	6	210	33	-	54	36	-	-	-	-	17	10	10	8	12	12	-	-	13	5	-	-

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Tumor and normal comparison

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Site	Sequence	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
S15	MTRQGLKSPQESLSD	-0.084	-	0.35	-	-	0.022	7.9e-4	0.086	-	-3.9e-9	0.069
S19	GLKSPQESLSDLGAI	-0.38	-	0.88	-	-	-	0.023	-2.7e-3	-	-0.24	-
S492	EFKFMEQSRSPSVSP	-	-	-	-	-	-	-	-	-	-	-
S494	KFMEQSRSPSVSPSK	6.5e-61	-	1.3e-15	5.5e-9	-	8.4e-12	4.9e-28	5.1e-21	-0.22	0.17	6.6e-8
S496	MEQSRSPSVSPSKQP	0.76	-	-	-	-	2.5e-4	0.75	-0.24	-	-0.029	-
S498	QSRSPSVSPSKQPVS	4.2e-11	-	-	3.9e-6	-	-	-	2.5e-6	-	-	-
S519	TLFEQYCSGGNPFEI	-5.7e-10	-	-2.6e-9	-	-	-	-0.005	-	-	-	-
T535	ANHKDEETEDVLASN	-1.1e-23	-	-1.9e-15	-	-	-1.1e-9	-8.8e-4	-	-	-	-
S541	ETEDVLASNGYESDE	-	-	-	-	-	-	-	-	-	-	-
Y544	DVLASNGYESDEQEK	-2.4e-9	-	-2.4e-9	-	-	-	-	-	-	-	-

Showing 1 to 10 of 20 rows

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* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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			Signed p-values
Phenotype	Site	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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			Signed p-values
Kinase	Site	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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			Signed p-values
Phosphatase	Site	Meta P	BRCA	CCRCC	COAD	GBM	HNSCC	LSCC	LUAD	OV	PDAC	UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Protein: ENSP00000307666Gene: VPS50

Lollipop plot

Phosphosite detection coverage

Tumor and normal comparison

Phenotype and mutation association

Cis-association

Kinase association

Phosphatase association

Protein: ENSP00000307666
Gene: VPS50