- H1-4:
- H1.4 linker histone, cluster member
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S2 | ______MSETAPAAP | 10 | 910 | 40 | - | 24 | 16 | 81 | 80 | 19 | - | 58 | 31 | 83 | 76 | 81 | 72 | 49 | 11 | 90 | 36 | 50 | 13 |
T4 | ____MSETAPAAPAA | 2 | 26 | - | - | - | - | - | - | 17 | - | 5 | 4 | - | - | - | - | - | - | - | - | - | - |
T18 | APAPAEKTPVKKKAR | 10 | 1387 | 113 | - | 52 | 48 | 93 | 95 | 90 | - | 108 | 62 | 108 | 96 | 110 | 101 | 66 | 17 | 105 | 44 | 70 | 9 |
S27 | VKKKARKSAGAAKRK | 1 | 7 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5 | 2 | - | - |
T146 | KKATGAATPKKSAKK | 8 | 880 | 30 | - | - | - | 65 | 68 | 99 | - | - | - | 94 | 86 | 80 | 69 | 83 | 19 | 63 | 24 | 84 | 16 |
S187 | KPKKAPKSPAKAKAV | 7 | 338 | 38 | - | - | - | 71 | 63 | - | - | - | - | 24 | 22 | 35 | 31 | 27 | 6 | 8 | 4 | - | 9 |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S2 | ______MSETAPAAP | 6.5e-6 | - | 1.5e-4 | 6.3e-11 | - | 7.1e-6 | 0.21 | -0.001 | -0.24 | -0.014 | 3.1e-4 |
T4 | ____MSETAPAAPAA | - | - | - | - | - | - | - | - | - | - | - |
T18 | APAPAEKTPVKKKAR | 9e-84 | - | 2.3e-12 | 1.9e-14 | - | 1.7e-14 | 1.4e-27 | 8.5e-10 | 2.6e-6 | 4.4e-13 | - |
S27 | VKKKARKSAGAAKRK | - | - | - | - | - | - | - | - | - | - | - |
T146 | KKATGAATPKKSAKK | 4.6e-8 | - | - | 1.6e-10 | - | - | 0.88 | 0.17 | 1.0e-5 | 4.2e-4 | -0.014 |
S187 | KPKKAPKSPAKAKAV | 2.7e-3 | - | - | 1.1e-7 | - | - | -0.21 | 0.25 | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |