Protein: ENSP00000307863
Gene: U2AF2

LinkedOmicsKB © 2022-2023 Zhang Lab

U2AF2:
U2 small nuclear RNA auxiliary factor 2

Lollipop plot

Phosphosites location and occurrence

Select Y-axis:

* Hover over the dots to see sequence motif and cohorts.

Structure

Phosphosite detection coverage

The frequency of phosphosite detection in the number of cohorts and tumor and normal samples

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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S2______MSDFDEFER151--------------4110----
S53RRNRDQRSASRDRRR350------8---99----186--
S55NRDQRSASRDRRRRS350------8---99----186--
S79EHGGLIRSPRHEKKK101546122-103809710099-10862108991101018319105448818
T119AAGQIPATALLPTMT5123--98----5311102625----242
T124PATALLPTMTPDGLA92257-2020192510-2013109222072--165
T126TALLPTMTPDGLAVT93249-24235755--4527545451414015
T133TPDGLAVTPTPVPVV1082342-5241746828-60362725897921254218618
T135DGLAVTPTPVPVVGS5658---54----991211----7-
S142TPVPVVGSQMTRQAR19--54----------------
Showing 1 to 10 of 11 rows
1025
rows per page

Tumor and normal comparison

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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S2______MSDFDEFER-0.017--------0.017--
S53RRNRDQRSASRDRRR-----------
S55NRDQRSASRDRRRRS-----------
S79EHGGLIRSPRHEKKK1.8e-8--2.3e-105.7e-15-2.2e-72.4e-59.1e-216.4e-4-9.5e-160.76
T119AAGQIPATALLPTMT-0.021-------0.021---
T124PATALLPTMTPDGLA-3.9e-3-2.9e-3---6.4e-4--5.1e-6---
T126TALLPTMTPDGLAVT-4.8e-7-0.89-6.1e-6--3.4e-8-----0.87
T133TPDGLAVTPTPVPVV-1.2e-3-0.55-1.1e-3--2.2e-11-0.88-0.077--0.976.5e-3
T135DGLAVTPTPVPVVGS-----------
S142TPVPVVGSQMTRQAR-----------
Showing 1 to 10 of 11 rows
1025
rows per page

* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.

Phenotype and mutation association

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Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.

Cis-association

BRCAS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylationCCRCCS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylationCOADS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylationGBMS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylationHNSCCS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylationLSCCS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylationLUADS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylationOVS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylationPDACS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylationUCECS2S53S55S79T119T124T126T133T135S142S294proteinRNASCNVmethylation

* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.

Kinase association

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Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.

Phosphatase association

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Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found

* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.