- APOBEC3F:
- apolipoprotein B mRNA editing enzyme catalytic subunit 3F
Lollipop plot
Phosphosites location and occurrence
Structure
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site
| Sequence | Cohorts | Total | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N | T | N |
S229 | MEVVKHHSPVSWKRG | 4 | 134 | - | - | - | - | - | - | 9 | - | 10 | 6 | 53 | 47 | - | - | - | - | - | - | - | 9 |
Tumor and normal comparison
Site
| Sequence | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
S229 | MEVVKHHSPVSWKRG | 4e-7 | - | - | - | - | - | 4e-7 | - | - | - | - |
Phenotype and mutation association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phenotype | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
cibersort: B cell memory | S229 | 0.039 | - | - | - | - | 0.092 | 0.21 | - | - | - | - |
HALLMARK_MITOTIC_SPINDLE | S229 | 0.048 | - | - | - | - | 0.73 | 0.014 | - | - | - | - |
cibersort: Macrophage M1 | S229 | 0.057 | - | - | - | - | 0.35 | 0.08 | - | - | - | - |
Clinical: Age | S229 | 0.072 | - | - | - | - | 0.19 | 0.22 | - | - | - | - |
HALLMARK_PANCREAS_BETA_CELLS | S229 | 0.095 | - | - | - | - | 0.97 | 0.02 | - | - | - | - |
PROGENy: TNFa | S229 | 0.099 | - | - | - | - | 0.018 | -0.98 | - | - | - | - |
xcell: Common myeloid progenitor | S229 | 0.1 | - | - | - | - | 0.27 | 0.23 | - | - | - | - |
Clinical: Tobacco_smoking_history | S229 | 0.13 | - | - | - | - | - | 0.13 | - | - | - | - |
HALLMARK_UV_RESPONSE_DN | S229 | 0.14 | - | - | - | - | 0.3 | 0.3 | - | - | - | - |
PROGENy: NFkB | S229 | 0.15 | - | - | - | - | 0.049 | 0.93 | - | - | - | - |
Cis-association
Kinase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Kinase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |
Phosphatase association
Signed p-values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Phosphatase | Site | Meta P | BRCA | CCRCC | COAD | GBM | HNSCC | LSCC | LUAD | OV | PDAC | UCEC |
No matching records found |