RPL38: ribosomal protein L38
Lollipop plot
Phosphosites location and occurrence
Select Y-axis:
Sample number
Cohort number
* Hover over the dots to see sequence motif and cohorts.
Structure
4ug0 chain Lk
4v6x chain Ck
5aj0 chain Ak
5lks chain Lk
5t2c chain e
6ip5 chain 2e
6ip6 chain 2e
6ip8 chain 2e
6lqm chain O
6lsr chain O
6lss chain O
6lu8 chain O
6ole chain l
6olf chain l
6olg chain Ak
6oli chain l
6olz chain Ak
6om0 chain l
6om7 chain l
6qzp chain Lk
6sxo chain Lk
6w6l chain l
6xa1 chain Lk
6y0g chain Lk
6y2l chain Lk
6y57 chain Lk
6y6x chain Lk
6z6l chain Lk
6z6m chain Lk
6z6n chain Lk
6zm7 chain Lk
6zme chain Lk
6zmi chain Lk
6zmo chain Lk
7bhp chain Lk
7f5s chain Lk
Phosphosite detection coverage
The frequency of phosphosite detection in the number of cohorts and tumor and normal samples
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BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
Site
Sequence
Cohorts
Total
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
T
N
S59 KAEKLKQS LPPGLAV 1 10 - - - - - - - - 7 3 - - - - - - - - - -
Tumor and normal comparison
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Site
Sequence
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
S59 KAEKLKQS LPPGLAV - - - - - - - - - - -
* P-values are from Wilcoxon rank sum test and can be clicked to show the box plots. Positive values mean higher abundance in tumor. BRCA and GBM do not have normal samples.
Phenotype and mutation association
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all sites
S59
all
clinical
pathway
cell type
genomic
mutation
Signed p-values
Phenotype
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values could be from test for Spearman correlation, Wilcoxon rank sum test, Jonckheere-Terpstra trend test or Cox regression depending on the data type. P-values for individual cohorts can be clicked to show the data plots.
Cis-association
BRCA S59 protein RNA SCNV methylation CCRCC S59 protein RNA SCNV methylation COAD S59 protein RNA SCNV methylation GBM S59 protein RNA SCNV methylation HNSCC S59 protein RNA SCNV methylation LSCC S59 protein RNA SCNV methylation LUAD S59 protein RNA SCNV methylation OV S59 protein RNA SCNV methylation PDAC S59 protein RNA SCNV methylation UCEC S59 protein RNA SCNV methylation
* The circles can be clicked to show the scatter plots. The color and size of the circles correlate with the Spearman correlation coefficients.
Kinase association
Protein
RNA
SCNV
methylation
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all sites
S59
Signed p-values
Kinase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.
Phosphatase association
Protein
RNA
SCNV
methylation
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all sites
S59
Signed p-values
Phosphatase
Site
Meta P
BRCA
CCRCC
COAD
GBM
HNSCC
LSCC
LUAD
OV
PDAC
UCEC
No matching records found
* P-values are from test for Spearman correlation. P-values for individual cohorts can be clicked to show the data plots.